Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1506 ATGGCAGTTTCAGAGAAGAAGAAGCTTCACCTTGTTCTCTTCATATTCATCATTATTACAGTACTCTTCTTCGACAAAACCCTCTCCATAAGGTTCCCAGATCGAATCCACGAACCTTCTCGCGACAAATCAGACTCACAACAACGATTCAAGATTGCCGTTTTCTCTCTCGGCAGTTTCTGGCGATCGGAAGCGGTGTTTGGATGCCTTCCCGGCGTTATTCGAACCACCGCTGGTTATTCCGGTGGATCTAAGCCTAATCCTGAATATAGAACCTTGGCTGATCACGCTGAGTCTGTTCAGGTTGAGTATGATCCACGAATTATTAGTTTTAGGGAGCTCTTGGATGTCTTTTGGTCAAGCCATGATCCGAGGCAAGTATATGGCCAAGGTCCTGATGTGGGTAATCAGTACAGATCTATTATTTTTGTTAATGGAACTGAAGAATCTAGAATGGCTGCTGTCAGCAAAGAACAGGAACAGACCAGGTCAAGAAGCAGCATTGTGACAACTCAAATTCTACAACTTGGAATTTTCTATCCCGCAGAGCCAGAGCACCAGAAATTTGAACTCAAGCAAAATACCTTCCTTATTCAGCTAATTGGAAACCTGCCTCAGGAGGAGCTTGAGAGGTCAAGCCTAGCAACAAAATTGAATGGATATGTTGCTGAACTTTGCCCTCCAAATATCCAAAAGCAGATTGATACAAAGATCAATGACATTATTAAAAAGGGTTGGCCCATTTTGAGGGAATTGTAG 759 0.4308 MAVSEKKKLHLVLFIFIIITVLFFDKTLSIRFPDRIHEPSRDKSDSQQRFKIAVFSLGSFWRSEAVFGCLPGVIRTTAGYSGGSKPNPEYRTLADHAESVQVEYDPRIISFRELLDVFWSSHDPRQVYGQGPDVGNQYRSIIFVNGTEESRMAAVSKEQEQTRSRSSIVTTQILQLGIFYPAEPEHQKFELKQNTFLIQLIGNLPQEELERSSLATKLNGYVAELCPPNIQKQIDTKINDIIKKGWPILREL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1506 252 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 51 192 IPR002569 GO:0008113
Lal15g1506 252 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 11 251 - -
Lal15g1506 252 Pfam Peptide methionine sulfoxide reductase 53 193 IPR002569 GO:0008113
Lal15g1506 252 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 50 204 IPR002569 GO:0008113
Lal15g1506 252 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE A5 11 251 - -
Lal15g1506 252 SUPERFAMILY Peptide methionine sulfoxide reductase 40 194 IPR036509 GO:0008113
Lal15g1506 252 Gene3D Peptide methionine sulphoxide reductase MsrA 44 246 IPR036509 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1506 Lal-Chr15 17182673 17186288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1506 K07304 - gmx:100782739 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1506 15 17182673 17186288 Lal15g1506 15 17182673 17186288 ECH
Lal15g1506 15 17182673 17186288 Lal16g1833 16 17447037 17449161 LSH