Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1441 ATGGATGAAGAATTGAATGATGATTCAACAAGATTGGATATTGTTGAAGGTGTGCAACATGATGATTATTCACTAAACCCTGAATGCCCAAAATTATTAAAAACCCAAGAAATCAGTGATGATGTTGGACAAGGTTTTAATGTACTTGAAGCTACTACTACCACTAGTCATGTGGCTATGCCACAACATTTTCGCCCGAGTCTATTTTCGGGTGATGGTGGAGCCATAGTTGAAGAGTTGACAGTGAAAAGTTTAACTGGTTCGGCCTTAGATATTGTTACATCGAACAGTCGGGAGGCTGTGTATAATAATAAGCAGAATCAGTGGCTGCAGAGTGATTCAGGAAAGGGAAATACTATAAGTGATATTGGGTATAGAAATAGTGTTCAAGCTACATCTAGTAGTGTTTGGGAGGATTTTGGGTCCACGGCTTTCCAAGAGACATTGGTAAGGGAATCAGTTGGTGATGATCATAGCAATGTCGTGGGACAGTTGGCTTCTGTTGATCATAAAGAGGACACAGGTGATGCTCATAGAGGAATACGGACGAAAGTTATATCCAAATCAGGATTTGCGGAGTATTTTATTAAAAATTCATTGAAGGGAAAGGGTTTTGTATGTATAGGTCCTCCATCTTCTAACGGCTCGTGTGTTGAATCTAGAGATCAAAATCTGATTAAGGCCTCTACTCAGAATGAGTCTAATGTATCACTCAGTTCTGTTTCGAAGACTGCAAATCCCCCTTATAATGCTCCAGTGTCTAGATCTGGTGGGTTTGACTGTGACGGTGTGACTTTGAGAGAATGGTTAAAAGCTGGGCACAGAAAAGGAGGCAAAGCGGAGCGTTTAAGTATATTTAGAAAGATTGTGGATTTGGTTAATGACTTTCACTCTCAGGGAGTTGCACTGCACCACCTATGCCCATCATATATTAAATTGTTACCGTCAAACCAGGTTATATACCTTGGTTTACCTATACAGAAACAGACATTAGGTACTGTTGCAAATTCCGAAGTTCTTCAGTTAGAGAGTTCTTTTATTAGAAAAAGGCTGTCAGAGCAGGTTACGCCTTTTGATATGCAATTGAAGAAAAAGAAAGTTGATAAGAATGTGAGAATTGCTGGTGATAGCAAAGTCAGTGCAGTTGGATCACAAGATTACTGCAGTGGATATAAGGAAGATATCCGATTTTCTAAACATAATATTCGGGGAGTGTCTAGCATCCCTCACACATCTAATGCAGAGAGGTTGAAATTGACTTTTTTAAATGAAAGATTGGAATTTAATTGGTATACAAGTCTTGAGGGAGGTTGCACAACATCATCAAATATCTACTGTTTGGGTGTCCTCTTTTTTGAGTTACTTGGCCATTTTGACTCTGAAAGAGCGCATAGTGCAGCTATGTCTGATCTTCGTCATAGGATTCTTCCTCCACTTTTCTTATCACAAAATCCTAAGGAAGCTGGATTTTGTCTTTGGCTGCTGCATCCCGAACCATCATCACGTCCAACAACAAGAGAGATCCTACGATCGGAAGTGATTAATGGAATGCAGGAGGTGTATAGTGAGGTATTATCATCAAGTATTGATGAAGATGAGGCAGAATCAGAATTGCTATCGCATTTCCTCATCTCATTAGAAGAGCAGAAGAAAATGGATGCTGTCCAATTGGTAGAAGAAATCAGATGGTTGGAATTAGATATAGAAGAGGTGGCGAGGAGACATAAATCAAGAGTATCCTTGGTTTCCTCTAGCTTACAGAATGACTCCTCTTGTCAAATAGAGAATGCATCTCTCAACAAAGAACCTTTGAGTTTAGCAACATTACCACACATGAGAAATATAAGTCAGATTGAAAATGCTTACTTTTCCTTGAGATCTAAAATTGAGCTTCTTGAAACAGATGCTGCAAATCGTCCAGATAAAGATGTACTAAGAAATCGCGAGGACTGGTATGTGGCCCAAAAAGACAATGAACAACATCAAAGGACAGATGCTTTAGGTGCCTTCTTTGATGGTTTGTGCAAGTATGCAAGTTATAGCAAGTTTGAAGTGCGGGGTGTACTAAGAAATGCAGATTTGAACAATCCTGCTAATGTAATCTGCTCTCTGAGCTTTGATAGGGATGAAGACTACTTTGCTGCTGCTGGGATATCAAAGAAAATAAAAGTATTTGAGTTTGGTGCACTTCTTAATGACTCTGTTGATATTCATTATCCTGTAGTTGAGATGTCAAACAGATCAAAGCTCAGTTGTGTTTGCTGGAATAACTACATCAAGAACTATCTTGCCTCCACAGACTATGACGGTGTAGTTAAGCTATGGGATGCCAGCACAGGTCAAGAGATTTCTCAATTCAGTGAACATGAAAAGAGGGCTTGGTCTGTGGATTTCTCTCCAGTATTCCCTACAAAATTTGCTAGTGGGAGTGATGATTGTTCTGTGAAGCTGTGGACCATCAGTGAGAGAAACAGTTCAGGCACAATCAGGAATGCTGCTAATGTCTGTTGCATTCAATTCTCTGCTCATTCCTCTCATTTGCTGGCCTTGGGATCTGCAGATAACTCAACTTATTGCTATGATCTTCGCAATCTTAGAAGCCCCTGGTGTGTGTTGGCTGGCCACCGTAAAGCTGTAAGCTTTGTCAAATTCTTAGACTCTGAAACAATTGTTTCCGCATCAACCGATAATACACTAAAGATCTGGGATCTCAATAAAACCTCTCCTGTGGGTCCATCTACCAGTGCTTGCAGCTTAACCCTATCAGGACATACTAATGAGAAGAATTTTGTGGGCTTAACAGTTGCTGATGGATATATTGCATGTGGTTCAGAAACAAATGAGGTTTATGCTTACTATAAGTCTCTTCCGATGCCAGTCGCTTCGCGCAAGTTCGGGTCTGTTGATCCCATTTCTGGTAAAGATATTGATGATGACAATGGTCAGTTTGTTTCAAGTGTGTGCTGGAGACGGAAATCAAACATGGTTATCGCCGCAAATTCAAGTGGATGTATGAAAGTGTTTCAGATGGTTTGA 3036 0.4009 MDEELNDDSTRLDIVEGVQHDDYSLNPECPKLLKTQEISDDVGQGFNVLEATTTTSHVAMPQHFRPSLFSGDGGAIVEELTVKSLTGSALDIVTSNSREAVYNNKQNQWLQSDSGKGNTISDIGYRNSVQATSSSVWEDFGSTAFQETLVRESVGDDHSNVVGQLASVDHKEDTGDAHRGIRTKVISKSGFAEYFIKNSLKGKGFVCIGPPSSNGSCVESRDQNLIKASTQNESNVSLSSVSKTANPPYNAPVSRSGGFDCDGVTLREWLKAGHRKGGKAERLSIFRKIVDLVNDFHSQGVALHHLCPSYIKLLPSNQVIYLGLPIQKQTLGTVANSEVLQLESSFIRKRLSEQVTPFDMQLKKKKVDKNVRIAGDSKVSAVGSQDYCSGYKEDIRFSKHNIRGVSSIPHTSNAERLKLTFLNERLEFNWYTSLEGGCTTSSNIYCLGVLFFELLGHFDSERAHSAAMSDLRHRILPPLFLSQNPKEAGFCLWLLHPEPSSRPTTREILRSEVINGMQEVYSEVLSSSIDEDEAESELLSHFLISLEEQKKMDAVQLVEEIRWLELDIEEVARRHKSRVSLVSSSLQNDSSCQIENASLNKEPLSLATLPHMRNISQIENAYFSLRSKIELLETDAANRPDKDVLRNREDWYVAQKDNEQHQRTDALGAFFDGLCKYASYSKFEVRGVLRNADLNNPANVICSLSFDRDEDYFAAAGISKKIKVFEFGALLNDSVDIHYPVVEMSNRSKLSCVCWNNYIKNYLASTDYDGVVKLWDASTGQEISQFSEHEKRAWSVDFSPVFPTKFASGSDDCSVKLWTISERNSSGTIRNAANVCCIQFSAHSSHLLALGSADNSTYCYDLRNLRSPWCVLAGHRKAVSFVKFLDSETIVSASTDNTLKIWDLNKTSPVGPSTSACSLTLSGHTNEKNFVGLTVADGYIACGSETNEVYAYYKSLPMPVASRKFGSVDPISGKDIDDDNGQFVSSVCWRRKSNMVIAANSSGCMKVFQMV 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1441 1011 SMART WD40_4 865 903 IPR001680 GO:0005515
Lal15g1441 1011 SMART WD40_4 914 953 IPR001680 GO:0005515
Lal15g1441 1011 SMART WD40_4 822 861 IPR001680 GO:0005515
Lal15g1441 1011 SMART WD40_4 737 776 IPR001680 GO:0005515
Lal15g1441 1011 SMART WD40_4 682 726 IPR001680 GO:0005515
Lal15g1441 1011 SMART WD40_4 779 819 IPR001680 GO:0005515
Lal15g1441 1011 SMART WD40_4 969 1009 IPR001680 GO:0005515
Lal15g1441 1011 ProSiteProfiles Trp-Asp (WD) repeats profile. 786 828 IPR001680 GO:0005515
Lal15g1441 1011 ProSiteProfiles Trp-Asp (WD) repeats profile. 872 912 IPR001680 GO:0005515
Lal15g1441 1011 SUPERFAMILY Protein kinase-like (PK-like) 261 523 IPR011009 -
Lal15g1441 1011 PRINTS G protein beta WD-40 repeat signature 763 777 IPR020472 -
Lal15g1441 1011 PRINTS G protein beta WD-40 repeat signature 806 820 IPR020472 -
Lal15g1441 1011 PRINTS G protein beta WD-40 repeat signature 890 904 IPR020472 -
Lal15g1441 1011 Pfam WD domain, G-beta repeat 871 903 IPR001680 GO:0005515
Lal15g1441 1011 Pfam WD domain, G-beta repeat 781 818 IPR001680 GO:0005515
Lal15g1441 1011 SUPERFAMILY WD40 repeat-like 694 1009 IPR036322 GO:0005515
Lal15g1441 1011 ProSitePatterns Trp-Asp (WD) repeats signature. 890 904 IPR019775 -
Lal15g1441 1011 PANTHER PROTEIN SPA1-RELATED 2 31 1011 IPR044630 GO:0009640
Lal15g1441 1011 Gene3D - 671 1011 IPR015943 GO:0005515
Lal15g1441 1011 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 872 905 - -
Lal15g1441 1011 ProSiteProfiles Trp-Asp (WD) repeats profile. 743 785 IPR001680 GO:0005515
Lal15g1441 1011 Gene3D Transferase(Phosphotransferase) domain 1 261 527 - -
Lal15g1441 1011 ProSitePatterns Trp-Asp (WD) repeats signature. 763 777 IPR019775 -
Lal15g1441 1011 PANTHER PROTEIN SPA1-RELATED 2 31 1011 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1441 Lal-Chr15 16593473 16607976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1441 806 952 Miscellaneous Gene Families AT5G08390 29.801 1.68e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1441 K16240 - gmx:100776980 1318.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1441 15 16593473 16607976 Lal15g1441 15 16593473 16607976 ECH
Lal16g1166 16 7969117 7980002 Lal15g1441 15 16593473 16607976 LSH