Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1416 ATGAAGTGCCGATCCGTGACTTGTATATTATCAGGTACCCCCTTTCCTCACCGTGTAACCGCCGTCGTCGCCTTCCCTCCCACCACTTTTTTCACCGCCGGATCCGATGGCTCCATCATCTGGTGGTCCCTCTCCCCGCAAGTTAAAGCTGTGGGCATGTTGTGTGGTCATGCAGCACCTATCACTGATCTTGCTATTTGTAGTCCAATTGCAGCAGAGGAAAGTTCTGATGGTTCGACTAATTTAGGGATGAATTCTATTTCGAGTAATTTTAGTGCATTGATAAGTGCAAGTTCTGATGGGTTTTTGTGTGTGTGGAGTAAAAGCAGTGGACATTGTCGTTGCCGGAGGCAATTGCCACCTTGGGTTGGCACTCCGCGCTTCATTCGAACCTTGCCTTCGAGGCCAAGATATGTGTGTATTGCTTGTTCTTTTATGGAAGGAAATGAGGGTTTGATGGATAGGGAAACTCATATAAGGAAGCCTCCTAAGTGCACTATTGTTATTGTTGACACGTATTTGCTTTCAATTACTCAAACTGTCTTTCATGGAAATCTGTCTATTGGTCCAATGAAGTTTATGGCAGTTGTTTTAGATGATAATGATGAGAACGGGTATTCTGTGTTTGTGGCTGATTCAGCTGGTAATCAACAGATGGTTTCGATGTCGGAGGACCATCGTGATCGAGGGGAAAGCTTGACAAGTTCACACAAAGATGCAACTCAGTTGCGAAGTTCTTGTTTTGAGGGTTTGATTGATGCCGATCAAATTGTTTCAATTTTAACTTATGGGAACATTATTGCTTTTATATTGAAAAATCGCTGTGTATTTAGGTTATCGTCTAGTGATACTGTAATTGGGAAGGTCTCTTTTGTGGACAATTTGTTCTATTCGGATGGGCATTCTACTCAAGTACATGTTGTGGGCGGCCTTTTTCTTGAAAGTGATGATTTGGGTAATATGCTTGATACCCACGAATGTAGTGACTCGATTCCCGTATATCTTGTTGTGTGGAACAATAGAGGTTCTGCAATTATCTATAAAATATCATATCAGAATGAAGTTATCCAATGTGAACCTCATTTTGAGATTTCTGCTACTCATTATCAGCCTGACATGAGATTATCTATTTTCTTTCAACAAGTAAATCATTATCTTATCTGCATCAAGTCTGTTTGCTTTCATTATGAGGAACCTTTACTATGGAGACCGCATGTCACAATCTGGTCGCTGAATCATTTTGATGATAAACCTGGTAAACTGTATCCTCAATGCAGAACGATAAGTGACGGCGTATCTTTCACCAATTGGTTTGAGGAGTCTACTACTCAGCTCAAGGGACTGGATACTCCAGAGATCAAATCAATCTCTGAATCAATTTCTGGTGCGAGTCCAAGTTCAGAAGATATAGATGACATACATGTAGATAGAATAAGTAATTACTATGCTTACAAGGGACAGATAGTTTCTTCTTCGATGATTATCTCTGAGAACCTCTTTACACCTTATGCTGTTGCATATGGTTTTCTAAGTGGAGCAATAGAGGTTGTAAGATTTGATCTGTTTCAAGGTATTTGCTTTGATGGTGCAAATGCCAATCCTGATGAAAAGTCAACTGTTTGCAAACAGTACTTCTCAGGACACACAGGTGCTGTACTTTGTTTGGCAGCACATCCTATGACGGGTAGTGCCAAACACGGGGATTTTAAAAGGGTTTTGCTGTCTGGAAGTATGGATTGCACACTTCGTTTGTGGGATCTTGACACCGGCTGTCTTATTATGGTAATGCATCATCATGTGGCTCCAGTGCAACAAATTATTCTTGCTCCATCTTTGACCAGACATCCTTGGAGTGACTGCTTCCTTTCAGTCGGAGAGGATGCATGTGTTGCTCTTGTTTCTCTTGAGACTCTCCGGGTGGAGAGGATGTTTCCTGGGCACTTGAACTATCCTTCCAAAGTTGTATGGGATGGAGCAAGAGGTTATATTGCCTGTCTCTGTCAAACACATCATGGAACATCTGATGCTGCTGATTTATTATACATTTGGGATGTGAAGACAGGTTCCCGTGAGCGAGTCCTACGTGGAACTGCTGCACATTCTATGTTTGATCATTTTTGTAGAAGTATCAGCATGAATTCCACATCTGGGACATTGCTGAATGGAAATACTTCAGTCTCTTCATTACTTCTTCCAATAGTTGATGATGCAAGGTTCTCTAACCCTGCCTTAAGTCTGTCAGAGAACTCCCTTACCTCATCAAGGTCATCACCAAGTCTTTCAAATATGACCGAGCCGAACTCGTCCAAATTAAATGCAGTGAAACAAAATTCACTGAAGCAAAATCCTTGGAGTAACAAGCTACCTATCAAATGCTCTTGCCCACTCCCTGGGATTGTGTCACTGAGTTTTGATCTTGCATCATTGATGTTATCATATCAAAAGGATGAGTCCATGGAAAATGGTGGCAGCAAGCCAGTGAATGTCGATTCGAAGCAGCAGGGTGTTCATGAGCAAAATCCAAGCTACCAAAGTGCAGAAAGTTTAGAGTGGCATGAGTGGGTTAGCCTATTTGAAGAATACTTACTTCGATTTAGCTTGTCATTTTTACATTTGTGGAATTTCGACAGTGAGCTCGATAATTTGCTGATAAGTGACATGAAGCTGAGAAGACCAGAAAATTTTGTGCTTGCTTCAGGTCTTCAGGGGGATAAAGGATCATTGACATTGACATTTCCTGGTCTGGGTGCTACTCTTGAGCTTTGGAAATCATCATCTGAATTTTGTGCAATGAGGTCATTGACGATGGTATCCCTTGCCCAACGTTTAATTAGCTTGTCTCACTCTGGTTCAGAAGCCAGCAGTGCTTTAGCAGGATTCTATACCCGGAATTTCATGGAAAAATTTCCTGATATGAAGCCACCGTCATTGCAGCTTTTGGTGGCTTTTTGGCAAGATGAAAGTGAACATGTACGTATGGCAGCACACTCTATATTTCATTGCGCTGCCTCTCATGCTATTCCACTTCCTTTACGCAATTCAGAACCTACCGAGCCATCTAATACAAGCTCCCTAACTGGAAGTAGAGGCAAACAACTGGGAGATACCATGGTAGAAAGTAGATTTCCTCATGCAAAAAGTCAACGATCTTCCCAAGATGAGGAATCTAAGATACTTTCTTGGCTAGAATCATTTGAAGTGCAAGACTGGATTTCTTGTGTTGGTGGAACAAGTCCAGATGCAATGACATCTCACATTATTGTTGCAGCTGCATTGACTGTTTGGTACCCTAGTCTTGTAAAGCCGAGTCTTGCCCCTTTGGTTGTTCATCCATTGATGAAGTTGGCTATGGCCATGAATGAGAAATACAGTTCCACTGCTGCTGAGCTCCTTGCAGAGGGCATGGAGAGTACATGGAAAGAACTCATTGTCTCTGAGATGCCTCGTCTGATTGGGGATATATTTTTCCAAGTAGAGTTGAGCGGCCCATCTAATTCAATGAAAGAAATTCCAGCTGCATACTTTTCTATTCAAAAGACTTTGGTTGAGGTTCTTCTTCCACATTTAGCTATGGCTGATATACCAGGATTTTTATCTGTGATAGAAAGCCAAATTTGGTCCACTGCATCTGATTCACCTGTCCACTTGGTGTCCCTCATGACTCTTACACGGATTATGCGTGGTTCTCCAATAAATTTGGCTCAATATCTTGACAAGGTGGTCAACTTCATTTTACAGACTATAGATCCGAGCAACTCAGTTCTGCGGAAAACATGCTACCAGAGTTCAATGACGACTTTGAAGGAGGTTGTACGTGTATATCCTATGGTTGCTGTTAATGATTCATGGACCAGACTGGCAGTAGGGGACGTGATTGGAGAAATTAATAACGCAAACATTAGGGTTTATGATATGCAAAGTGTGACAATGGTTAAAGTTTTGGATGCAAGTTGGCCTCCTGGACTTCCCAGTTTGCTCACAGCAGCTTCAGGAACAACGTTAACTATTGCAATTTCAGCATTGAGTTTTTCGCCAGATGGCGAGGGGCTGATTGCCTTTTCTGAACATGGGCTAATGATTAGATGGTGGTCACTTGGATCTGTTTGGTGGGAGAAACTAAACCGGAACTATGTACCTGTCCAGTGTACGAAACTAATCTTCGTTCCTCCTTGGGAGGGATTCTCACCTAATTCAACCAGGTCAAGCATAATGGCCAACATTTTTGAAAATGATAGGTCCTTGGACCTTCAGGACAATGTGAGGGATCATGGCGAAAGTTTGAAGCAATTACTTCATAATCTGGACCTCTCTTATCAACTAGAATGGGTTGGTGAACGAAAAGTACTTCTTACAAGGCACGACCATGATTTGGGCACTTTTCAGCTATAA 4389 0.4199 MKCRSVTCILSGTPFPHRVTAVVAFPPTTFFTAGSDGSIIWWSLSPQVKAVGMLCGHAAPITDLAICSPIAAEESSDGSTNLGMNSISSNFSALISASSDGFLCVWSKSSGHCRCRRQLPPWVGTPRFIRTLPSRPRYVCIACSFMEGNEGLMDRETHIRKPPKCTIVIVDTYLLSITQTVFHGNLSIGPMKFMAVVLDDNDENGYSVFVADSAGNQQMVSMSEDHRDRGESLTSSHKDATQLRSSCFEGLIDADQIVSILTYGNIIAFILKNRCVFRLSSSDTVIGKVSFVDNLFYSDGHSTQVHVVGGLFLESDDLGNMLDTHECSDSIPVYLVVWNNRGSAIIYKISYQNEVIQCEPHFEISATHYQPDMRLSIFFQQVNHYLICIKSVCFHYEEPLLWRPHVTIWSLNHFDDKPGKLYPQCRTISDGVSFTNWFEESTTQLKGLDTPEIKSISESISGASPSSEDIDDIHVDRISNYYAYKGQIVSSSMIISENLFTPYAVAYGFLSGAIEVVRFDLFQGICFDGANANPDEKSTVCKQYFSGHTGAVLCLAAHPMTGSAKHGDFKRVLLSGSMDCTLRLWDLDTGCLIMVMHHHVAPVQQIILAPSLTRHPWSDCFLSVGEDACVALVSLETLRVERMFPGHLNYPSKVVWDGARGYIACLCQTHHGTSDAADLLYIWDVKTGSRERVLRGTAAHSMFDHFCRSISMNSTSGTLLNGNTSVSSLLLPIVDDARFSNPALSLSENSLTSSRSSPSLSNMTEPNSSKLNAVKQNSLKQNPWSNKLPIKCSCPLPGIVSLSFDLASLMLSYQKDESMENGGSKPVNVDSKQQGVHEQNPSYQSAESLEWHEWVSLFEEYLLRFSLSFLHLWNFDSELDNLLISDMKLRRPENFVLASGLQGDKGSLTLTFPGLGATLELWKSSSEFCAMRSLTMVSLAQRLISLSHSGSEASSALAGFYTRNFMEKFPDMKPPSLQLLVAFWQDESEHVRMAAHSIFHCAASHAIPLPLRNSEPTEPSNTSSLTGSRGKQLGDTMVESRFPHAKSQRSSQDEESKILSWLESFEVQDWISCVGGTSPDAMTSHIIVAAALTVWYPSLVKPSLAPLVVHPLMKLAMAMNEKYSSTAAELLAEGMESTWKELIVSEMPRLIGDIFFQVELSGPSNSMKEIPAAYFSIQKTLVEVLLPHLAMADIPGFLSVIESQIWSTASDSPVHLVSLMTLTRIMRGSPINLAQYLDKVVNFILQTIDPSNSVLRKTCYQSSMTTLKEVVRVYPMVAVNDSWTRLAVGDVIGEINNANIRVYDMQSVTMVKVLDASWPPGLPSLLTAASGTTLTIAISALSFSPDGEGLIAFSEHGLMIRWWSLGSVWWEKLNRNYVPVQCTKLIFVPPWEGFSPNSTRSSIMANIFENDRSLDLQDNVRDHGESLKQLLHNLDLSYQLEWVGERKVLLTRHDHDLGTFQL 1462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1416 1462 MobiDBLite consensus disorder prediction 817 841 - -
Lal15g1416 1462 SMART WD40_4 538 586 IPR001680 GO:0005515
Lal15g1416 1462 SMART WD40_4 47 107 IPR001680 GO:0005515
Lal15g1416 1462 SMART WD40_4 637 684 IPR001680 GO:0005515
Lal15g1416 1462 SMART WD40_4 589 634 IPR001680 GO:0005515
Lal15g1416 1462 SMART WD40_4 5 43 IPR001680 GO:0005515
Lal15g1416 1462 SMART WD40_4 1322 1364 IPR001680 GO:0005515
Lal15g1416 1462 Pfam WD domain, G-beta repeat 541 586 IPR001680 GO:0005515
Lal15g1416 1462 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1462 - -
Lal15g1416 1462 SUPERFAMILY WD40 repeat-like 14 309 IPR036322 GO:0005515
Lal15g1416 1462 ProSitePatterns Trp-Asp (WD) repeats signature. 573 587 IPR019775 -
Lal15g1416 1462 ProSiteProfiles Trp-Asp (WD) repeats profile. 545 595 IPR001680 GO:0005515
Lal15g1416 1462 SUPERFAMILY WD40 repeat-like 27 713 IPR036322 GO:0005515
Lal15g1416 1462 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1462 - -
Lal15g1416 1462 Gene3D - 488 797 IPR015943 GO:0005515
Lal15g1416 1462 MobiDBLite consensus disorder prediction 1014 1032 - -
Lal15g1416 1462 MobiDBLite consensus disorder prediction 748 771 - -
Lal15g1416 1462 MobiDBLite consensus disorder prediction 1010 1032 - -
Lal15g1416 1462 SUPERFAMILY ARM repeat 937 1297 IPR016024 -
Lal15g1416 1462 Gene3D - 17 355 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1416 Lal-Chr15 16308091 16318247 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1416 K24738 - gmx:100818675 2208.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1416 15 16308091 16318247 Lal15g1416 15 16308091 16318247 ECH
Lal16g1185 16 8142569 8152302 Lal15g1416 15 16308091 16318247 LSH