Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0831 CTTATCTCTCGTGTCAAAAAAACCCGCCACAGTTCTCGAAATTCGCTCTTTTTCTTTTCTCCCCCATTCTTTCGCAACAGCAGAAAGAGAATAAGAAGCCCTAGCTCCAAAACGTCATCGTTTCGTTCCTCCACTCAACACATGGCTTCTTCACTCCTTCAACCTCCTTCTTCTCTCTTCACTTCCACTTCTCGTTCCTCCACTCTTCGAACCTTTGCACCTTCCGTTCCTCATTCTCGTAACACTCGCATCTTCTCACTTAATAGCGTGAAATGTGATTTGCCAGAACCTTCAAATATAATGAACCGGAAACCGATCATCCCGGTTCTGAATGAGAGGACGCTTCCAAAGTTTATGGATTCTGCGAGGATGGAGAAAACCGTTAACAGAAACGGTAACCGGTTGAAATTGTTCTCTGGCACCGCTAATCCTGCACTTTCTCAGGAAATTGCTTGGTACATGGGCCTGGAGCTCGGGAAAATTTCCATAAAGCGATTTGCTGATGGTGAAATATATGTCCAGTTACAAGAGAGTGTTAGAGGATGCAATGTATACCTTATACAACCAACCTGTCCTCCTGCAAATGAGAATCTCATGGAGCTTAAGATTATGATTGATGCTTGTCGGAGGGCATCTGCCAAAAACATCACTGCTGTGATTCCGTATTTTGGATATGCCAGAGCAGATAGAAAGGCAAGTATTTCTACTCAAGGGCGTGAATCCATTGCAGCTAAACTTGTTGCAAACCTTATTACAAAAGCCGGGGCAGATCGTGTTCTTGCTTGTGACCTTCATTCAGGGCAGTCCATGGGTTACTTTGATATTCCCGTGGATCATGTACATTGCCAACCTGTGATCCTTGACTATCTTGCTAGTAAGGGTATAAGTTCAAATGACTTGGTGGTTGTCTCCCCTGATGTTGGTGGTGTTGCAAGGGCACGTGCTTTTGCGAAGAAATTATCTGATGCTCCTTTAGCTATTGTAGACAAAAGGCGCCATGGACACAATGTGGCTGAGGTGATGAACCTGATTGGTGATGTAAAAGGCAAAGTTGCAGTAATGGTGGATGATATGATTGATACTGCTGGGACTATTGCTAAGGGTGCGGCACTATTACATGAAGAGGGAGCCAGGGAAGTGTATGCATGCTGCACTCATGCTGTTTTCAGTCCTCCAGCAATTGAGAGGTTGTCAAGTGGTTTATTTCAAGAAGTGATTATTACAAACACCATTCCAGTTGAAGAGAAGAACTATTTCCCACAGTTAACTATTCTCACTGTTGCGAACCTGTTGGGTGAAACTATTTGGCGTATTCACGACGATTGCTCTGTCACTAGTATTTTTCAATGA 1350 0.4385 LISRVKKTRHSSRNSLFFFSPPFFRNSRKRIRSPSSKTSSFRSSTQHMASSLLQPPSSLFTSTSRSSTLRTFAPSVPHSRNTRIFSLNSVKCDLPEPSNIMNRKPIIPVLNERTLPKFMDSARMEKTVNRNGNRLKLFSGTANPALSQEIAWYMGLELGKISIKRFADGEIYVQLQESVRGCNVYLIQPTCPPANENLMELKIMIDACRRASAKNITAVIPYFGYARADRKASISTQGRESIAAKLVANLITKAGADRVLACDLHSGQSMGYFDIPVDHVHCQPVILDYLASKGISSNDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHEEGAREVYACCTHAVFSPPAIERLSSGLFQEVIITNTIPVEEKNYFPQLTILTVANLLGETIWRIHDDCSVTSIFQ 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0831 449 Gene3D - 282 425 IPR029057 -
Lal15g0831 449 MobiDBLite consensus disorder prediction 33 62 - -
Lal15g0831 449 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 135 449 IPR037515 GO:0004749
Lal15g0831 449 Gene3D - 138 440 IPR029057 -
Lal15g0831 449 SUPERFAMILY PRTase-like 200 440 IPR029057 -
Lal15g0831 449 PANTHER RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 2, CHLOROPLASTIC 94 448 - -
Lal15g0831 449 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 94 448 IPR005946 GO:0000287|GO:0004749|GO:0009165
Lal15g0831 449 SMART Pribosyltran_N_2 135 255 - -
Lal15g0831 449 CDD PRTases_typeI 284 410 IPR000836 -
Lal15g0831 449 TIGRFAM ribP_PPkin: ribose-phosphate diphosphokinase 136 449 IPR005946 GO:0000287|GO:0004749|GO:0009165
Lal15g0831 449 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 135 255 IPR029099 -
Lal15g0831 449 Pfam Phosphoribosyl synthetase-associated domain 340 448 IPR005946 GO:0000287|GO:0004749|GO:0009165
Lal15g0831 449 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 263 278 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
Lal15g0831 449 MobiDBLite consensus disorder prediction 29 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0831 Lal-Chr15 6166538 6171073 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0831 K00948 - gmx:100807743 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0831 15 6166538 6171073 Lal23g0769 23 10254658 10259999 LSH