Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0567 ATGTCAGTGGAGTATTCATGTTGTGAAACACATTTCTTTGTAAACATAGCAGTAATAGTGCTACTGGTTTTGTTCGCTGGTATGATGTCTGGTCTTACTTTGGGTCTCATGTCTTTGAGTCTAGTTGATCTTGAAGTTCTCGCTAAGTCTGGTACTCCTCATGATCGAAAGCATGCTGAGAAAATATTGCCTGTTGTCAAAAATCAACACTTGTTGCTTTGCACCCTGCTAATTTGCAATGCTGCAGCCATGGAGGCACTTCCTATTTTTCTTGACAGTCTTATTACTGCATGGGGTGCTATCCTGATTTCTGTGACATTAATTCTTCTGTTTGGCGAGATTATACCCCAATCAGTTTGTACTCGGTATGGTTTAGCAATTGGTGCAACTGTGGCTCCATTTGTCCGTGTACTTGTATGGATATGTTTTCCCATTGCTTTCCCAATTAGCAAGCTGCTGGACTATTTTCTGGGCCATCGTGAAGAAGCTCTTTTCCGCAAAGCCGAGTTAAAGACACTTGTGAATTTCCATGGCAATGAGGCCGGAAAAGGCGGGGAACTGACACATGACGAAACAACGATCATTGCTGGGGCACTTGAGCTCGGTGATAAGACAGCCAGTGATGTCATGACTCCTATATCTGAAACGTTTTCCATTGATATTAATTCAAAGCTTGATAGGGAACTGATGAATGAAATATTTGAGAATGGACATAGCAGAATCCCAGTCTATTATGAGAAGCCTACAAACATTATCGGGCTCGTGCTGGTCAAGAATTTATTAACAATTCATCCAGAAGATGAAACACCCGTGAAGAGTGTAACTATACGCAGGATTCCAAGGGTTCCGGAAAGTATAGCACTTTATGACATTTTGAATGAGTTCCAGAAGGGCCATAGCCACATGGCTGTTGTTGTAAGCCGGAGTGACAAGACAAAGCATCAATCTTCCCGAAATAATGGCAATAAGTCGACCCGGGATGTGAAGGTGGATATTGATGGTGAAAAGCCCCCCCGAGAGAAAGTTATGAAACCCAAATTGCCAATCCATAAGCGGAAAAACTTAACTAATACGAACAAGTCAGTAAAGGATGGTGGTTCTCGGAGCAGTAAATGGTCGAAAAATATGTACTCGGATATTTTGGAGATAGATGGCAGTCCGCTTCCAAACCTCCCCGACGAAGAAGAAACTGTTGGACTAATTACTATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAAATCTTTGATGAGACAGATTATTATTTTGAAGACTCATAA 1281 0.4176 MSVEYSCCETHFFVNIAVIVLLVLFAGMMSGLTLGLMSLSLVDLEVLAKSGTPHDRKHAEKILPVVKNQHLLLCTLLICNAAAMEALPIFLDSLITAWGAILISVTLILLFGEIIPQSVCTRYGLAIGATVAPFVRVLVWICFPIAFPISKLLDYFLGHREEALFRKAELKTLVNFHGNEAGKGGELTHDETTIIAGALELGDKTASDVMTPISETFSIDINSKLDRELMNEIFENGHSRIPVYYEKPTNIIGLVLVKNLLTIHPEDETPVKSVTIRRIPRVPESIALYDILNEFQKGHSHMAVVVSRSDKTKHQSSRNNGNKSTRDVKVDIDGEKPPREKVMKPKLPIHKRKNLTNTNKSVKDGGSRSSKWSKNMYSDILEIDGSPLPNLPDEEETVGLITMEDVIEELLQEEIFDETDYYFEDS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0567 426 MobiDBLite consensus disorder prediction 306 341 - -
Lal15g0567 426 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Lal15g0567 426 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Lal15g0567 426 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 426 IPR045095 GO:0010960
Lal15g0567 426 Gene3D - 376 418 IPR046342 -
Lal15g0567 426 Gene3D - 189 324 IPR046342 -
Lal15g0567 426 MobiDBLite consensus disorder prediction 324 341 - -
Lal15g0567 426 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 426 - -
Lal15g0567 426 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Lal15g0567 426 SUPERFAMILY CBS-domain pair 194 412 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0567 Lal-Chr15 3928947 3933753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0567 K16302 - gmx:100801937 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0567 15 3928947 3933753 Lal15g0567 15 3928947 3933753 ECH
Lal16g0631 16 4037856 4042465 Lal15g0567 15 3928947 3933753 LSH