Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0489 ATGCAGTTTCCTCACTGTCTGGAACAACAGAAGAATAATATGAACAAACAACAACATAGTCATGTGAGACTTTTCTGTCTCATTACCCTCTTCTCATCATCTTTCACTATCGGTTTCGCCACGGTGGCCGGAGAAGACAAAAACCCTTTTACCCCAAAGGCTTATCTAATTCGTTACTGGGACAAAGAGATCCGAAACAACCTTCCCAAACCATCGTTCCTTTTCTCCAAAGCCTCAACGCTGAATGCTGTTGATGCGGCGGCATTTTCCAAACTCGCTGCCGTTGACGGCGGCGTTGCACTCTCCACGCGCCTCCCTGAGTTCTGCGCCGCAGCGAAACTCCTCTGCTTCCCTGATTTGCAACCGAGTTTGGAAAAGCATGACAAAGACTCAAACTTTGCAGTTTATCAAGACAAGAACTTCACGAATTACGGAACGGGTCGACCCGGTGGGCTTGACTCGTTTAAGAACTACTCAGATGATTCGAATATTCCGGTGAACGATTTCCGCCGCTACAGCCGCAACTCCGCCGGCCATAATGATAGTTTCTCAAGCTACGCAGGCAATGGAAACGTCGTCGAACAGACCTTCCACACCTACGGCACCGGAGCCACCGGTGGCGACGGTGACTTCAAAGTTTACACCGACCAAACCAATGTCCCTGATCTCCGATTCACAACCTACTCCACCGACGCAAATGGAAGAACCCAATCCTTCACTGCGTACTCCGAAAACGGCAATTCAGGTGAACAATCATTCTCATCGTACGGCAAAAACGGTAACGGCCCTGAGAACAAGTTCTCATCGTACGGAAAAGGCTCAAACGTTGTCGGTTCCGGTTTTTCCAATTATGCTGAAACCGCAAATGGCGCCAATGACAGTTTCACAAGTTATGGATTTGACATGAACAACCCCACTATCAATTTCAAAAGTTATGCTGATGATGGAAACGGTGTTACTGAGAGTTTCACTAGTTACCTTGATCAATCTAATGTTGGTGCTGATTCATTCACTTCTTATGCTAAAAATTCCAATGCTGCTGAAATTGGTTTTAGCAACTATGACCAATCATTCAATGAAGCAACAGATAAATTCACAGGTTATGGAAAAGGTGCTACCGGTGAAAGTAAGGTTGGATTTACAACATATGGGTTGAACTCCACGTTTAAGGAGTATAACAAAGAAGATGTTTCTGTCTCTTTTTCTAGGTATGCTAATTCGAGTTCGAGTGGTTCAGTGAGTCAAAGTGGTGCATCAGTGAGTGGCAGTTTGGTAAATAAGTGGGTTGAGCCAGGCAAATTCTTCAGGGAGAAGATGATCAAGGAAGGGATTGTGATGCCCATGCCTGATATTAGAGATAAAATGCCTCAAAGGTTGTTTTTGCCTCGGAGTATTTTGTCCAAATTACCCTTCTCATCATCAAAGATCTCTGAGTTGAAGAAGATTTTCAAGGTAAATGATAATAGTTCAATGGAAAAGATGATGAAGGATTCTTTGGGTGAGTGTGAGAGGGTACCAAGTCCTGGTGAGACAAAAAGATGTGTTGGGTCAATGGAGGATATGATCGACTTTGCTACTTCGGTTTTAGGTCGAAATGTGGTGGCTCGAACAACAGAGAATGTAAATGGGTCAAAGAAGAATGTGATGGTGAGTAATGTTAAAGGGATCAATGGTGGTAAAGTCACACAATCTGTGTCTTGTCACCAAAGTTTGTTTCCTTATTTGCTCTATTATTGCCACTCAGTGCCTAAGGTTCGGGTTTATGAAGCGGATTTACTTGACCCGAATACGAAATCCAAGATTAACCATGGTGTTGCTATATGTCACTTGGATACCTCTGTTTGGAGCCCAACCCATGGTGCATTTCTCGCTCTAGGGTCGGGTCCGGGTCGGATTGAAGTGTGCCACTGGATCTTTGAGAATGACTTGACTTGGACAACTGCTGATTGA 1950 0.4446 MQFPHCLEQQKNNMNKQQHSHVRLFCLITLFSSSFTIGFATVAGEDKNPFTPKAYLIRYWDKEIRNNLPKPSFLFSKASTLNAVDAAAFSKLAAVDGGVALSTRLPEFCAAAKLLCFPDLQPSLEKHDKDSNFAVYQDKNFTNYGTGRPGGLDSFKNYSDDSNIPVNDFRRYSRNSAGHNDSFSSYAGNGNVVEQTFHTYGTGATGGDGDFKVYTDQTNVPDLRFTTYSTDANGRTQSFTAYSENGNSGEQSFSSYGKNGNGPENKFSSYGKGSNVVGSGFSNYAETANGANDSFTSYGFDMNNPTINFKSYADDGNGVTESFTSYLDQSNVGADSFTSYAKNSNAAEIGFSNYDQSFNEATDKFTGYGKGATGESKVGFTTYGLNSTFKEYNKEDVSVSFSRYANSSSSGSVSQSGASVSGSLVNKWVEPGKFFREKMIKEGIVMPMPDIRDKMPQRLFLPRSILSKLPFSSSKISELKKIFKVNDNSSMEKMMKDSLGECERVPSPGETKRCVGSMEDMIDFATSVLGRNVVARTTENVNGSKKNVMVSNVKGINGGKVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPNTKSKINHGVAICHLDTSVWSPTHGAFLALGSGPGRIEVCHWIFENDLTWTTAD 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0489 649 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 28 649 - -
Lal15g0489 649 ProSiteProfiles BURP domain profile. 434 648 IPR004873 -
Lal15g0489 649 Pfam BURP domain 434 646 IPR004873 -
Lal15g0489 649 SMART BURP_2 432 648 IPR004873 -
Lal15g0489 649 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 28 649 - -
Lal15g0489 649 MobiDBLite consensus disorder prediction 237 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0489 Lal-Chr15 3348335 3351289 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0489 - - gmx:100797939 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0489 15 3348335 3351289 Lal15g0489 15 3348335 3351289 ECH
Lal16g0543 16 3481001 3484093 Lal15g0489 15 3348335 3351289 LSH