Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0482 ATGTTGGGTGGTAACAATGGCAATCCCGTGCTTCCTGTTTTCCTTGACGAGACTCAGTTTCGGTATCAAACTAATGCAGCAAATCAGTTGCAGTTGTTTGGAAATTTACAAGCTGGAAGTGGTGTTGATCCAGTTAATTACTTTGGAAATGAGCATATGAGTTCCATGATTCAGCCTAATAAACGGAGCAGGGAAATGGAAGATATCTCAAAGCAGCAAAAGCTTCAGATTTCTTTAAATTACAATATCTGTCAAGATGATGGTAATCGACCAGGAAGCATTCCAAGCCGAAACCCTGTGTCAACAGGATTGAGGCTTTCATATGATGATGATGAGCGTAACTCTTCTGTCACATCTGCCAGTGGCAGTATGAGTGCCACACCTTCAGTCATGTTGTCCCTTGGTGACAATATCAGAACTGAGCTTGATAGGCAGCAAGATGAGTTGGATCAGTATATTAAACTTCAGAAGGAACAATTGTCAAAAGGGGTAATAGACATGAAGCAGAAGCACATGGCTTTTCTCCTTTCTTCTATTGAGAAAGGTGTTAGTAAGAAGCTAAGGGAAAAAGATGTTGAGATAGAGAACATGAACCGAAAGAATCGGGAGCTAGGAGAGAGAATAAAACAGGTAGCTATTGAAGCACAAAACTGGCACTACAAAGCAAAGTATAATGAGTCAGTTGTCAATGTGTTACGGAACAATCTCCAGCAGGCAATTTCACAAGGAGTTGAACAAGGGAAGGAAGAAGGTTTCGGAGACAGTGAAGTTGATGATGCTGCTTCATACATAGATCCTAATAACTTTCTGAGCATCCCAGGCGCGCCTACGAAATCTACTTTCAAGAGCTACAAAGGCACGGAGAATCTGAGTTGTAGAGCATGCAAGGCAAAGGAGGTTTCTATGTTGTTGATACCTTGTAGGCACCTGTGCTTGTGTAAGGACTGTGATGGGTTTATCAATGTTTGTCCTGTATGCCAAATGATAAAAACTGGGAGTGTAGAGGTTTATCTGTCTTAA 1020 0.4147 MLGGNNGNPVLPVFLDETQFRYQTNAANQLQLFGNLQAGSGVDPVNYFGNEHMSSMIQPNKRSREMEDISKQQKLQISLNYNICQDDGNRPGSIPSRNPVSTGLRLSYDDDERNSSVTSASGSMSATPSVMLSLGDNIRTELDRQQDELDQYIKLQKEQLSKGVIDMKQKHMAFLLSSIEKGVSKKLREKDVEIENMNRKNRELGERIKQVAIEAQNWHYKAKYNESVVNVLRNNLQQAISQGVEQGKEEGFGDSEVDDAASYIDPNNFLSIPGAPTKSTFKSYKGTENLSCRACKAKEVSMLLIPCRHLCLCKDCDGFINVCPVCQMIKTGSVEVYLS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0482 339 Coils Coil 187 214 - -
Lal15g0482 339 MobiDBLite consensus disorder prediction 86 128 - -
Lal15g0482 339 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 4 338 IPR017066 -
Lal15g0482 339 ProSiteProfiles Zinc finger RING-type profile. 292 327 IPR001841 -
Lal15g0482 339 MobiDBLite consensus disorder prediction 86 103 - -
Lal15g0482 339 PANTHER S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED 4 338 - -
Lal15g0482 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 276 339 IPR013083 -
Lal15g0482 339 PIRSF SBP1_RNase_bind 1 339 IPR017066 -
Lal15g0482 339 Pfam Zinc finger, C3HC4 type (RING finger) 289 327 - -
Lal15g0482 339 MobiDBLite consensus disorder prediction 113 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0482 Lal-Chr15 3298747 3303081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0482 292 327 Miscellaneous Gene Families AT2G21380 41.667 4.58e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0482 K19042 - gmx:100791550 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0482 15 3298747 3303081 Lal15g0482 15 3298747 3303081 ECH
Lal16g0535 16 3418152 3422016 Lal15g0482 15 3298747 3303081 LSH