Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0458 TTTATTATCTGCTTGAAAATAAGTAATAAGAGTTGTATTTTCCTTTTGTGCAGGTCAGTGTCTTCTGAAGTTTCCAGTGACCTCATAATTCAAGTTAAAGGAAGTAGATATCTTCTTCATAAGTTTCCACTGCTGTCCAAATGTTTGCGGCTGCAAAGGTTGTGTTCAGAATCTTCTGATTCTCCTCAACACCAAATAGTCCAGCTCCCTGATTTCCCTGGTGGGGTGGAGGCATTTGAACTGTGTGCTAAGTTCTGTTACGGAATTACAATCACTGTCAGTCCTTACAACATTGTAGCTGTGCGATGCGCCGCCGAATACCTACAGATGATTGAGGATGTTGAGAAGGGCAACCTAATTTATAAGCTTGAGGTGTTCTTCAATTCTTGCATTCTTCATGGATGGAAGGATTCAATTGTGGCACTTCAGACTACCAAAGGAATGCCTTTGTGGTCAGAAGACTTGGCTATTACCAGCAGATGCATTGAAGCTGTTGCCACAAAAGTCTTAAAAAATCCTTCAAAGGTGAGTTTGTCACATAGTCATTCCAGAAGGGTCAGGGATGATGTGTCTTGCAATGGAACTGAAAGCCTGAGACATCATAAATCATCAAGCAAGGGATGGTGGGCTGAAGATTTAGCTGAATTGAGCATAGACCTTTATTGGAGAACCATGATCGCAATCAAATCAAGTGGCAAGATACCCTCGGATCTCATCGGCGATGCATTAAAAATTTATGCATCAAGATGGTTACCTAATATTACAAGGAATGGACTTGTCAAGAAGCAAACTTCATCTGATTCAGACTCATCAGACTCGGCCACTGAAATAACCTCGAAGCATCGTCTTCTTTTGGAATCAATAGTAAGCTTGCTTCCAGCAGAGAAAGGTGCTGTTTCTTGTAGCTTCCTTCTTAAACTCTTGAAGGCATCCAATATTCTTAATGCCTCTTCATCTTCAAAGATAGAATTAGCTACAAGGGTAGGACTTCAGTTGGAGGAAGCCACAGTGAATGATCTTTTAATACCATCACTATCTTACACAAATGATACACTCTATGATGTTGAGTTGGTGATGACCATATTGGAACAGTTTATATCACAAGGGCAGAGTCCTCCAACTAGTCCTCCAAGGTCCAGGCTAGCCTTTGAAAGAAGGAGATCTCGTTCCGCCGAGAATATTAACTGTGAATTCCAGGAGAGCAGGAGGTCCTCTTCAGCATCTCACAGTGCAAAATTGAAGGTGGCAAAGCTTGTGGATAGGTACCTTCAAGAAGTTGCCAGGGATGTTAATTTTCCCTTGTCAAAATTCATTGCTCTTGCTGAAATTTTACCAGAGTTTGCAAGACATGATCATGATGATCTCTACAGAGCTATTGACATTTATCTAAAGGCTCATCCAGAACTCAACAAAAGCGAAAGAAAGAGACTATGTCGAATTCTTGACTGCAAAAAACTGTCTATGGCCGCATGCATGCATGCTGCACAGAATGAGCTACTCCCCTTAAGGGTTGTTGTCCAAGTTCTCTTCTTTGAGCAAGCTAGAGCAGCCGCAGCTGGTGGAAAAGTAACCGATTTGCCGAGCAATATCAAGGAATTGCTCACAACACATGGTATTGATCCATCAAAATATGCTGCACCCTTAAGCACTACCACAAGTATACATGCTGAGGACAATTGGAGTGTTTCAGGATTCAAGTCACCAAAGTCAAGGTCTTCAACTCTGAAGATGAAGCTAGCTGAGGAGGATGATTTAGACGAAAATGATTCGCACCGAAATGGAATTGGCAGAAATTCAAGATTTAAGTCCATCTGTGCTATTCCTACCCAACCCAAAAAAATGCTTAGTAAGTTGTGGTCTACCAATAGAAGTGTCAATGAAAAGAATTGA 1890 0.4138 FIICLKISNKSCIFLLCRSVSSEVSSDLIIQVKGSRYLLHKFPLLSKCLRLQRLCSESSDSPQHQIVQLPDFPGGVEAFELCAKFCYGITITVSPYNIVAVRCAAEYLQMIEDVEKGNLIYKLEVFFNSCILHGWKDSIVALQTTKGMPLWSEDLAITSRCIEAVATKVLKNPSKVSLSHSHSRRVRDDVSCNGTESLRHHKSSSKGWWAEDLAELSIDLYWRTMIAIKSSGKIPSDLIGDALKIYASRWLPNITRNGLVKKQTSSDSDSSDSATEITSKHRLLLESIVSLLPAEKGAVSCSFLLKLLKASNILNASSSSKIELATRVGLQLEEATVNDLLIPSLSYTNDTLYDVELVMTILEQFISQGQSPPTSPPRSRLAFERRRSRSAENINCEFQESRRSSSASHSAKLKVAKLVDRYLQEVARDVNFPLSKFIALAEILPEFARHDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMAACMHAAQNELLPLRVVVQVLFFEQARAAAAGGKVTDLPSNIKELLTTHGIDPSKYAAPLSTTTSIHAEDNWSVSGFKSPKSRSSTLKMKLAEEDDLDENDSHRNGIGRNSRFKSICAIPTQPKKMLSKLWSTNRSVNEKN 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0458 629 Gene3D Potassium Channel Kv1.1; Chain A 9 116 IPR011333 -
Lal15g0458 629 ProSiteProfiles NPH3 domain profile. 207 515 IPR027356 -
Lal15g0458 629 SUPERFAMILY POZ domain 17 112 IPR011333 -
Lal15g0458 629 PANTHER OS12G0117600 PROTEIN 18 625 IPR043454 -
Lal15g0458 629 Pfam NPH3 family 208 491 IPR027356 -
Lal15g0458 629 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 18 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0458 Lal-Chr15 3101298 3104137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0458 24 521 EF-hand Containing Proteins AT3G44820 36.882 4.63e-97 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0458 - - gmx:100797361 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0458 15 3101298 3104137 Lal15g0458 15 3101298 3104137 ECH
Lal16g0513 16 3252319 3255522 Lal15g0458 15 3101298 3104137 LSH