Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0262 ATGCTACTATTACCACTTACCCACTCACTCTCCATAACCCAATTCAACACCACCCATCACCTCCTCAAATCCACCTCCACTCGCTCCTTAGCCCGCTTCCACCGTCACCACCACCGTCAGAACCACCAACTCTCTCTCCCACTCTCACCAGGCAGTGACTACACCCTATCCTTCAACTTAGGTTCCCAACCCATAACCCTCTACATGGACACTGGCAGTGACCTTGTTTGGTTCCCATGCTCCCCCTTCGAGTGCATCCTCTGCGAAGGTAAACCCAACCCTACCAAACCCCACAACCTCACTCTCTCACAATCTCACCCCGTTTCATGCCAATCCCATGCATGTTCTGCTGCACATAATCACGTGCCTAACTCTAACCTCTGCGCTATTGCACGCTGCCCCTTAGACTCTATCGAAATACGAGAGTGCTCTTCTCTCACGTGTCCACCTTTCTACTACGCTTATGCTGATGGAAGTTTAATCGCTAACCTCTATAGAACTAACCTATCTATCTCTTCTCTTCTTCTCAATAATTTTACCTTCGGTTGTGCCCACACCACCCTTGCTGAACCTACCGGTGTAGCTGGTTTCGGTCGTGGTGTTTTGTCTTTCCCTGCTCAGATTTCAACCTTCAATCCAAAACTTGGTAACCGTTTTTCTTACTGCTTGGTCTCTCATTCGTTCGAAGGGGAACGAGTTAACCCACCGAGTCCACTCATTCTCGGTCGTTATGATAACGCCGGTGGTGAAGAAGTTGAGTTTGTTTACACCTCTATGCTTCGAAACCCGAAGCATCCTTATTTCTACTGTGTTGGTCTCGCTGGAATCTCTGTCGGGAAGAAGAGTATTCCGGCGCCAGAGATGCTGAAAAAGGTGGATTATAAAGGAAATGGTGGGGTGGTTGTTGATTCCGGTACGACGTTTACAATGTTGCCGGCGAGTTTGTATAACTCGGTGGTGGATGAGTTCGATGGTCGAGTTAGAAGAGTTCACGTGCGTGCGAGTGAGATTGAGAAGAAAACGGGTCTCGGACCGTGTTATTACTTAGACCGAGTTTCGGAGGTTCCAACGGTGACGTTTCATTTCGTTGGGAATCATTCCAGTGTGGTCCTGCCTAAGAGGAATTACTTCTACGAGTTTTTGGACGGTAGTGATAGAGTTAGAAGGACGAGGAAAGTGGGGTGCATGATGTTAATGAACGGTGGTGATGAAACTGAGTTAAGTGGTGGGCCCGGAGCTACTCTCGGTAATTATCAACAGCAGGGGTTTGAGGTTGTTTACGACTTGGAGAAGCAGCGCGTGGGTTTCGCAAGGAGGCATTGCGCGTCGCTTTGGGATCGCATAAACCATGAGAAAAAATAA 1362 0.4853 MLLLPLTHSLSITQFNTTHHLLKSTSTRSLARFHRHHHRQNHQLSLPLSPGSDYTLSFNLGSQPITLYMDTGSDLVWFPCSPFECILCEGKPNPTKPHNLTLSQSHPVSCQSHACSAAHNHVPNSNLCAIARCPLDSIEIRECSSLTCPPFYYAYADGSLIANLYRTNLSISSLLLNNFTFGCAHTTLAEPTGVAGFGRGVLSFPAQISTFNPKLGNRFSYCLVSHSFEGERVNPPSPLILGRYDNAGGEEVEFVYTSMLRNPKHPYFYCVGLAGISVGKKSIPAPEMLKKVDYKGNGGVVVDSGTTFTMLPASLYNSVVDEFDGRVRRVHVRASEIEKKTGLGPCYYLDRVSEVPTVTFHFVGNHSSVVLPKRNYFYEFLDGSDRVRRTRKVGCMMLMNGGDETELSGGPGATLGNYQQQGFEVVYDLEKQRVGFARRHCASLWDRINHEKK 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0262 453 Gene3D Acid Proteases 245 446 IPR021109 -
Lal15g0262 453 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 300 311 IPR001969 GO:0004190|GO:0006508
Lal15g0262 453 SUPERFAMILY Acid proteases 49 446 IPR021109 -
Lal15g0262 453 Pfam Xylanase inhibitor C-terminal 269 437 IPR032799 -
Lal15g0262 453 Pfam Xylanase inhibitor N-terminal 54 226 IPR032861 -
Lal15g0262 453 CDD pepsin_A_like_plant 54 441 IPR034161 -
Lal15g0262 453 Gene3D Acid Proteases 40 242 IPR021109 -
Lal15g0262 453 ProSiteProfiles Peptidase family A1 domain profile. 54 437 IPR033121 -
Lal15g0262 453 PANTHER ASPARTYL PROTEASES 2 448 IPR001461 GO:0004190|GO:0006508
Lal15g0262 453 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 2 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0262 Lal-Chr15 1790962 1792323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0262 29 444 Miscellaneous Gene Families AT1G77480 25.111 4.67e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0262 - - adu:107488223 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0262 15 1790962 1792323 Lal15g0262 15 1790962 1792323 ECH
Lal16g0328 16 1973745 1975175 Lal15g0262 15 1790962 1792323 LSH