Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1572 ATGTTAACCTCAAATTCCATGCCCATTGACAAGCACTTTCAGAAACTATCTGTCGGCCTACCTCCTCCAAAGAAGGAGACTTTATCCAGACACTCATTTTTTGGGCCAAATGGTCTTCAGGGTCAATGGCTTCGACCTAGCACGGAAATAAAGGTTCAATATCCAAGCAGTAATGATCTGACACATGACAAGGACTCAAGCCTGAATCAGGCTGGGCAATATGATCTTGTGGCAGTTAAAGATGGTGATCAAGGACCAGTTACATCCACACTGGACTCAATTCTCTCCTTGGATGATGGTCGATGGTTGCGTCCTGCTGTCGAGTCCTGTTCTTCTGTTTTAATTGAATCAAGGGAGGACCCTTTTCAGTCTCTCAACATCAAGCAGCCTCTACCTCCTCCTGTTCTTGCTCAGGTGTACCCGGAACATGCCCCTATTCATCCTTCAAAAGTTACAGATCCACTGCCAGGACCAGCTAAAGCTTCTCAGGATTCTGGAGTTGGTCCCACTACATATCAACACTTACATATTCCTATCAAAATGTTGGAAGATTTTTTGAGATTGGCTTCGGGAAACACACGGAAGAACTTAGAGACGTGTGGTGTTCTTGCAGGTTCCCTGAAAAACAGGGTTTTCCTTATCACTACACTTATAATCCCAAAGCAGGAATCAACGTCAGACTCGTGCCAAACATTGAATGAAGAAGAAATATTTGAAGTACAAGACAGTTTATCACTTTTCCCTTTAGGTTGGATACATACACACCCGTCACAGACTTGTTTCATGTCATCTGTGGATCTTCATACACATTACTCATACCAGATCATGTTACCGGAGGCAATTGCAATTGTCATGGCTCCTACAGATACAACAAGTCCACATGGCATATTTCATCTGTCTGATCCAGGTGGTGTTTCTGTCATTCGTAACTGTCGACAACGTGGATTTCATCCCCATGAAGAGCCTTCAGATGGAAGTCAAATATATGAGCATTGTTCTCATGTCTATATGAATGCTAACTTGAAGTTTGATGTTGTTGACCTGAGGGAGAGATGA 1056 0.4318 MLTSNSMPIDKHFQKLSVGLPPPKKETLSRHSFFGPNGLQGQWLRPSTEIKVQYPSSNDLTHDKDSSLNQAGQYDLVAVKDGDQGPVTSTLDSILSLDDGRWLRPAVESCSSVLIESREDPFQSLNIKQPLPPPVLAQVYPEHAPIHPSKVTDPLPGPAKASQDSGVGPTTYQHLHIPIKMLEDFLRLASGNTRKNLETCGVLAGSLKNRVFLITTLIIPKQESTSDSCQTLNEEEIFEVQDSLSLFPLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTTSPHGIFHLSDPGGVSVIRNCRQRGFHPHEEPSDGSQIYEHCSHVYMNANLKFDVVDLRER 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1572 351 CDD MPN_AMSH_like 172 349 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Lal14g1572 351 ProSiteProfiles MPN domain profile. 175 305 IPR037518 -
Lal14g1572 351 PANTHER AMSH-LIKE PROTEASE 4 349 - -
Lal14g1572 351 SMART pad1_6 170 302 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lal14g1572 351 PANTHER AMSH-LIKE UBIQUITIN THIOESTERASE 3 4 349 - -
Lal14g1572 351 Gene3D Cytidine Deaminase, domain 2 159 351 - -
Lal14g1572 351 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 171 278 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lal14g1572 351 SUPERFAMILY JAB1/MPN domain 174 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1572 Lal-Chr14 16309673 16318375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1572 K11866 - gmx:100812784 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1572 14 16309673 16318375 Lal14g1572 14 16309673 16318375 ECH
Lal14g1572 14 16309673 16318375 Lal19g1125 19 14827540 14834927 LSH