Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1520 ATGTCTCTCAATTTGTCTTCTCCATCTGAAGTCAACTCACTCTTTTTCACTGATTCCTTCAAATCCAACACCCTCCTCACTACTAAATTCCCAGGTAGTTTTGCTTTAAAAAGAAAAGATTGTGGAGCAACAGCTGGAAGACGGATTTATTGCTCGGCTCAGGCAGCACCACCACCAGCCTGGCCAGGACGAGCAGTCCCAGAAACAAGTATTAAAACTTGGGAGGGGCCAAAACCCATCTCCATCGTTGGATCTACTGGTTCAATTGGAACTCAGACACTAGATATTCTCGCTGAGAATCCAGATAAGTTTAGAGTTGTAGCACTTGCAGCTGGTTCAAACATTACTCTTCTTGCAGATCAGATAAGGAGATTTAAGCCTCAACTTGTTTCTGTTAGAGATGAGTCCCTAATTGCGGAACTTGAAGAGGCTTTAAATGGTGTTGACCAAAAACCTGAGATCATCCCTGGAGAACAGGGAATCATTGAGGTTGCTCGCCACCCAGATGCTGTCAGCGTAGTCACGGGAATAGTGGGCTGTGCAGGACTCAAGCCAACAGTTGCTGCGATAGAAGCAGGGAAAGACATAGCCTTGGCGAACAAAGAGACGCTGATTGCTGGAGGTCCTTTTGTTCTTCCGCTTGCTAAGAAGCATAACATAAAAATACTTCCTGCTGATTCAGAGCATTCTGCCATTTTTCAGTGTATCCAAGGGTTGCCGGAGGGTGCACTCAGGAAAATTATTTTAACTGCCTCTGGAGGTTCTTTCAGGGATTGGCCTGTAGAAAAGCTAAAAGATGTTAAAGTTGCTGATGCATTAAAACATCCCAACTGGAGTATGGGAAAAAAGATAACTGTGGACTCTGCTACCCTTTTCAATAAGGGTCTAGAAGTAATTGAAGCACATTATTTGTTTGGAGCTGACTATGATGACATTGAGATTGTCATTCATGCTCAATCAATCATACATTCAATGATTGAAACACAGGACTCATCTGTTTTGGCACAGTTGGGGTGGCCTGATATGCGCTTGCCAATCCTCTATACATTATCATGGCCTGACAGAGTTCATTGTTCTGAAATAACTTGGCCTCGCCTTGATCTTTGCAAGCTTGGTTCACTAACATTTAAAGCTCCTGACAATGTTAAATACCCATCCATGAATCTTGCCTATGCTGCTGGCCGTGCTGGAGGCACCATGACAGGGGTTCTTAGTGCAGCAAATGAGAAAGCTGTAGAATTGTTTATTGATGAAAAGATTAGCTATTTGGATATTTTCAAGGTTGTGGAGCTAACATGTGAGAAGCATCAAGATGAGTTGGTAACATCGCCTTCTCTCGAGGAAATTGTTCACTACGACGACTGGGCGCGAAAATATGCTGCTAGTCTGCAAAGCTTGGCGAGCTCGACTCCTGTTCCTGCATGA 1425 0.4386 MSLNLSSPSEVNSLFFTDSFKSNTLLTTKFPGSFALKRKDCGATAGRRIYCSAQAAPPPAWPGRAVPETSIKTWEGPKPISIVGSTGSIGTQTLDILAENPDKFRVVALAAGSNITLLADQIRRFKPQLVSVRDESLIAELEEALNGVDQKPEIIPGEQGIIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHNIKILPADSEHSAIFQCIQGLPEGALRKIILTASGGSFRDWPVEKLKDVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGADYDDIEIVIHAQSIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDRVHCSEITWPRLDLCKLGSLTFKAPDNVKYPSMNLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQDELVTSPSLEEIVHYDDWARKYAASLQSLASSTPVPA 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1520 474 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE-RELATED 1 471 - -
Lal14g1520 474 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain 222 305 IPR013644 GO:0005515
Lal14g1520 474 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 1 471 IPR003821 GO:0008299|GO:0030604|GO:0046872
Lal14g1520 474 Hamap 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 80 463 IPR003821 GO:0008299|GO:0030604|GO:0046872
Lal14g1520 474 SUPERFAMILY 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 370 463 IPR036169 -
Lal14g1520 474 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 77 226 IPR036291 -
Lal14g1520 474 TIGRFAM Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 78 460 IPR003821 GO:0008299|GO:0030604|GO:0046872
Lal14g1520 474 Gene3D - 72 226 - -
Lal14g1520 474 PIRSF Dxp_reductoisomrs 77 469 IPR003821 GO:0008299|GO:0030604|GO:0046872
Lal14g1520 474 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 202 340 - -
Lal14g1520 474 Pfam DXP reductoisomerase C-terminal domain 337 458 IPR026877 -
Lal14g1520 474 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase 80 208 IPR013512 GO:0070402
Lal14g1520 474 Gene3D - 382 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1520 Lal-Chr14 16015783 16020732 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1520 K00099 - gmx:100790607 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1520 14 16015783 16020732 Lal14g1520 14 16015783 16020732 ECH
Lal14g1520 14 16015783 16020732 Lal19g1082 19 14513192 14517541 LSH