Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0873 ATGTCGCAGCTGAAGCAAATGTCGCACAATGATAATAGCGCTCCTTCAACTCCAGGGAAGTTCAAGATTGAGAAATCCCCTTACTTCAACCGCACTCGGTGGCACTCTTCACTCGCCAAGTTAACTCTCTGGTCCTTCGCATTCTTGGCCGTGATCTTGATCTTTTTCCTCCGATCACCGTCGTCGTCGGCGTCAATCCCCACCGACCCTTCCCGCCGCTCTTTACGGACCTACAATTGGGGCGGCTCCGCTTGGGAGAAGCGGGTCCGGTCATCGGCCCGTGTCCGATCACGAAACGGGATGACTGTTCTGGTGACCGGAGCAGCCGGTTTCGTTGGGACCCACGTGGCCTCGGCGCTGAAACGCCGAGGCGACGGGGTCCTGGGACTTGATAGTTTCAATGACTATTATGACCCTTCATTGAAACGTGCGCGCCAAGCTTTATTGGAACGCACTGGGGTTTACATTGTGGAAGGTGATATCAATGATGAAGCACTTTTGAGAAAATTGTTTGAGGTTGTTCCATTCACTCATGTGATGCATTTGGCTGCTCAAGCTGGAGTTAGGTATGCTATGGAAAATCCTGGCTCTTATGTGCATAGTAACATTGCTGGTTTTGTTAATTTGCTTGAGGTTTGTAAGAGTTTGAATCCACAACCTGCTATTGTTTGGGCTTCTAGTAGTTCTGTTTATGGACTTAATACTAAGGTGCCGTTTTCCGAAAGGGATAGGACTGATCAACCTGCTAGTTTGTATGCTGCTACTAAGAAGGCTGGTGAAGAGATTGCTCACACTTATAATCATATATACGGTCTTTCGTTGACGGGGTTGCGGTTCTTTACTGTTTATGGTCCTTGGGGTAGGCCTGATATGGCATATTTCTTTTTCACTAGGGATATTTTGAAGGGGAAGTCGATCCCGGTGTTTGAGGCAGCAAATCATGGTACGGTTGCGAGGGATTTTACTTACATTGATGATATTGTGAGGGGGTGCTTGGGTGCATTGGATACTGCGGAGAAGAGTACTGGCAGTGGTGGGAAGAAGAAGGGGCCGGCACAGTTGAGGGTGTTCAATTTGGGGAATACTTCACCTGTGCCTGTTAGTGAGCTTGTGAGCATTTTGGAGAGGCTGTTGAAGGTTAAGGCGAAGAGGAACATAATGAGATTGCCGCGGAATGGTGATGTGCAGTTTACTCATGCAAACATTAGCTATGCTCAGAGAGAGCTTGGATATAAGCCTACGACAGATCTACAGACTGGTTTGAAGAAATTTGTCCGGTGGTACCTGAATTACTATTCCGGGGGGAAGAAAGCTGTTGAGTGA 1323 0.4807 MSQLKQMSHNDNSAPSTPGKFKIEKSPYFNRTRWHSSLAKLTLWSFAFLAVILIFFLRSPSSSASIPTDPSRRSLRTYNWGGSAWEKRVRSSARVRSRNGMTVLVTGAAGFVGTHVASALKRRGDGVLGLDSFNDYYDPSLKRARQALLERTGVYIVEGDINDEALLRKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSLNPQPAIVWASSSSVYGLNTKVPFSERDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKSIPVFEAANHGTVARDFTYIDDIVRGCLGALDTAEKSTGSGGKKKGPAQLRVFNLGNTSPVPVSELVSILERLLKVKAKRNIMRLPRNGDVQFTHANISYAQRELGYKPTTDLQTGLKKFVRWYLNYYSGGKKAVE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0873 440 PANTHER EPIMERASE-RELATED 12 438 - -
Lal14g0873 440 PRINTS Nucleotide sugar epimerase signature 129 145 - -
Lal14g0873 440 PRINTS Nucleotide sugar epimerase signature 319 334 - -
Lal14g0873 440 PRINTS Nucleotide sugar epimerase signature 354 369 - -
Lal14g0873 440 PRINTS Nucleotide sugar epimerase signature 394 411 - -
Lal14g0873 440 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 98 433 IPR036291 -
Lal14g0873 440 Pfam NAD dependent epimerase/dehydratase family 103 340 IPR001509 -
Lal14g0873 440 PANTHER UDP-GLUCURONATE 4-EPIMERASE 2-RELATED 12 438 - -
Lal14g0873 440 Gene3D - 99 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0873 Lal-Chr14 11144000 11145322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0873 4 438 Miscellaneous Gene Families AT4G00110 86.207 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0873 K08679 - gmx:100788739 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0873 14 11144000 11145322 Lal19g0246 19 2391619 2392935 LSH