Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0872 ATGGCCCAGATCACCAGAATCCACAATGGAGTTCAAACCACTCAGATTTTTCATCATATTCCCAATTCCCAAAAACCCAAATCAGTAAATTCAGTTTCATTGAGGTCACAGCTTTGGGGCTCCTCAAAATCTTGGACCTTGAAGCATAAAAGTGGAGGCTTTGTGCCAAATTGTGATGTGGGTAAGGGCATTTCGGGCATGGTCAAGGTTTCTGCCTCAGTTGCCGCCGCGGAGAAGCCGTCGACAGCGCCGGAGATCGTGTTGGAACCCATCAGAGAAATTTCTGGTACAATTACTTTGCCTGGATCAAAGTCTTTATCCAATCGGATTTTGCTTCTTGCTGCACTCTCTGAGGGAACAACTGTTGTGGACAACTTGTTGAATAGCGAGGACGTTCATTACATGCTTGGTGCATTAAGGACCCTCGGACTACATGTGGAAGACGACAAAACAACTAAACAAGCAATTGTTGAAGGCTGTGGAGGGTTATTTCCCACCGGAGTATCCAAAGATGAAGTTAATTTATTCCTCGGAAACGCTGGCACTGCAATGCGCCCTTTGACAGCAGCTGTGACCGCTGCAGGCGGAAATGCAAGCTACATACTTGATGGGGTTCCCCGAATGAGAGAGAGGCCTATTGGGGATTTGGTGGCTGGTCTCAAGCAACTTGGCGCAGATGTTGATTGTTCTCTTGGCACAAACTGTCCACCGGTTCATGTAAACGGGAAGGGAGGACTTCCCGGGGGAAAGGTGAAGCTGTCAGGATCAATTAGCAGTCAATACTTGACTGCTTTGCTTATGGCAGCTCCTTTGGCCCTTGGTGATGTGGAAATTGAGATTATTGATAAGCTGATTTCTGTTCCATATGTTGAAATGACTTTGAAGTTAATGGAGCGCTTTGGAGTTTCTGTGGAACACAGTGGTGACTGGGACAGGTTCTTGGTCCGTGGAGGTCAGAAATACAAGTCTCCCGGGAATGCTTTTGTTGAAGGTGATGCTTCAAGTGCCAGTTACTTCCTAGCCGGTGCAGCAGTTACTGGCGGGACTATCACCGTTCAAGGCTGTGGTACTAGCAGTTTACAGGGGGATGTAAAATTTGCTGAAGTTCTTGAAAAGATGGGAGCTAAAGTTTCATGGACAGAGAACAGTGTCACTGTTACTGGGCCACCGAGAGATCCTTCAGGTCGAAAAGTCTTGCAAGGCGTTGATGTCAATATGAACAAGATGCCAGATGTTGCCATGACACTTGCAGTAGTTGCACTGTTTGCTAATGGTCCCACTGCTATTAGAGATGTGGCTAGTTGGAGAGTTAAAGAGACGGAGAGAATGATAGCAATCTGCACTGAACTGACCAAGCTAGGAGCAACGGTTGAAGAAGGTCCTGATTACTGTGTGATAACTCCACCTGAGAAATTGAAGGTCACATCTATAGACACATATGATGACCATAGAATGGCAATGGCATTTTCTCTTGCTGCTTGTGGCGACGTTCCGGTAACCATCAATGATCCTGGTTGCACCAGGAAAACATTCCCTGACTATTTCCAAGTCCTTGAGAGGTTTACAAAGCATTAA 1575 0.4641 MAQITRIHNGVQTTQIFHHIPNSQKPKSVNSVSLRSQLWGSSKSWTLKHKSGGFVPNCDVGKGISGMVKVSASVAAAEKPSTAPEIVLEPIREISGTITLPGSKSLSNRILLLAALSEGTTVVDNLLNSEDVHYMLGALRTLGLHVEDDKTTKQAIVEGCGGLFPTGVSKDEVNLFLGNAGTAMRPLTAAVTAAGGNASYILDGVPRMRERPIGDLVAGLKQLGADVDCSLGTNCPPVHVNGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERFGVSVEHSGDWDRFLVRGGQKYKSPGNAFVEGDASSASYFLAGAAVTGGTITVQGCGTSSLQGDVKFAEVLEKMGAKVSWTENSVTVTGPPRDPSGRKVLQGVDVNMNKMPDVAMTLAVVALFANGPTAIRDVASWRVKETERMIAICTELTKLGATVEEGPDYCVITPPEKLKVTSIDTYDDHRMAMAFSLAACGDVPVTINDPGCTRKTFPDYFQVLERFTKH 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0872 524 ProSitePatterns EPSP synthase signature 2. 436 454 IPR023193 -
Lal14g0872 524 PANTHER 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE, CHLOROPLASTIC 1 524 - -
Lal14g0872 524 ProSitePatterns EPSP synthase signature 1. 175 189 IPR023193 -
Lal14g0872 524 Hamap 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 92 524 IPR006264 GO:0003866|GO:0009073
Lal14g0872 524 Gene3D Enolpyruvate transferase domain 319 521 IPR036968 GO:0016765
Lal14g0872 524 Gene3D Enolpyruvate transferase domain 102 313 IPR036968 GO:0016765
Lal14g0872 524 SUPERFAMILY EPT/RTPC-like 86 520 IPR013792 GO:0003824
Lal14g0872 524 TIGRFAM aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 96 523 IPR006264 GO:0003866|GO:0009073
Lal14g0872 524 Pfam EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 89 518 IPR001986 GO:0016765
Lal14g0872 524 PANTHER AROM/DEHYDROQUINATE SYNTHASE 1 524 - -
Lal14g0872 524 CDD EPSP_synthase 94 521 IPR006264 GO:0003866|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0872 Lal-Chr14 11133824 11139535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0872 K00800 - gmx:100789268 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0872 14 11133824 11139535 Lal19g0247 19 2402097 2408570 LSH