Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0070 ATGGTAAAGGCTGTAAAGTTTGGTATTTTGGTAGATTGCTTCTTCACTTTAAAGGCATGGAATGCACAGAATGGTGGAGCAGCAGCTATTCTTGTAGCAGATGACAGAATAGAGCCATTGATCACAATGGACTCTCCTGAAGAAGGGAATGGTTCAAACAATGATGATTATGTTGAAAAGATTAGCATCCCTTCTGCTCTTATCAGCATGGCACTTGGTGATAGCATCAAGACCGCTCTCTCAAATGGAGACATGGTTAATGTTAATCTTGACTGGAGAGAGGCACTTCCACACCCTGATGATAGAGTTGAATATGAATTATGGACTAATAGTAATGATGAGTGTGGACCAAAGTGTGAGAATTTAATTAACTTTGTCAAGAGTTTTAAAGGTGCAGCTCAGTTACTAGAGCAGAAAGGGTTTACTCAGTTTACACCTCACTATATAACTTGGTATTGTCCAGAAGCATTTATCTTGAGCAAACAGTGCAAGTCTCAGTGCATAAACAATGGGAGGTATTGTGCACCAGATCCTGAACAAGATTTCAGTCGAGGGTATGATGGAAAAGATGTTGTTATTCAAAATTTGAGGCAAGCTTGCTTCTTTAAAGTTGCAAATGAAAGCGGAAAACCTTGGCAATGGTGGGACTATGTCACCGATTTCTCAATCAGGTGCCCAATGAGAGAGAACAAGTTCAACGAAGAATGCTCAGATCAAGTCATTAAGTCTCTTGGTATTGATTTGAAGAAGGTTAAAGATTGTGTTGGGGATACTCATGCTAATGTTGAAAATGCTATTCTTAAGGGTGAACAGGATGCACAGATTGGCAAAGGCAATCGCGGTGATATTACTATACTACCGACTATTGTTATAAACAACAGACAGTATAGAGGTAAGTTGTCAAGAGCAGCAGTCCTCAAGGCACTCTGTGCATCATTCCAAGAAACCACTGAGCCATCAATTTGTTTAACTCCAGACATGGAAACAAATGAGTGTTTGCAAAACAATGGTGGATGTTGGCAGGACAAATCTGCTAACATTACTGCATGCAGGGACACTTTCAGAGGAAGAGTTTGTGAGTGTCCTATTGTACAAAATGTGAAGTTTGCTGGTGATGGATATACTCACTGTGAAGCAACAGGAGCCTTGAGATGTGCAGTGAACAATGGAGGGTGTTGGAAGGGAGCCCAAGGTGGGAGGGCTTACTCGGCTTGTATCGATGATCACACAAAAGGTTGTAAATGTCCACCTGGATTTAGGGGTGATGGAGTCAAGTCATGTGAAGACATTGATGAGTGCAAAGAGAAATTGGCCTGCCAGTGCCCAGAGTGCAAATGCAAAAATACATGGGGGAGTTATGAATGCAAATGCAATGGTGGTTTGTACTACGCAAGAGAGAATGACATGTGTATTGGTAAGTATAGTGCGTCAGGTAGCAGCGGGGGTAGTGGCTTTGTTTGGATGTTTGTTCTGATCCTGGCTGTTGCTGGTGCTGCTGGTTTTGCATTTTATAAGTACAGAATCCAGAGATATATGGATTCTGAGATAAGGGCAATAATGGCCCAATACATGCCCTTGGATAATCAACCGGAGAACTCCAATCATAATCAACCTCATCATGGGGTCTAG 1629 0.418 MVKAVKFGILVDCFFTLKAWNAQNGGAAAILVADDRIEPLITMDSPEEGNGSNNDDYVEKISIPSALISMALGDSIKTALSNGDMVNVNLDWREALPHPDDRVEYELWTNSNDECGPKCENLINFVKSFKGAAQLLEQKGFTQFTPHYITWYCPEAFILSKQCKSQCINNGRYCAPDPEQDFSRGYDGKDVVIQNLRQACFFKVANESGKPWQWWDYVTDFSIRCPMRENKFNEECSDQVIKSLGIDLKKVKDCVGDTHANVENAILKGEQDAQIGKGNRGDITILPTIVINNRQYRGKLSRAAVLKALCASFQETTEPSICLTPDMETNECLQNNGGCWQDKSANITACRDTFRGRVCECPIVQNVKFAGDGYTHCEATGALRCAVNNGGCWKGAQGGRAYSACIDDHTKGCKCPPGFRGDGVKSCEDIDECKEKLACQCPECKCKNTWGSYECKCNGGLYYARENDMCIGKYSASGSSGGSGFVWMFVLILAVAGAAGFAFYKYRIQRYMDSEIRAIMAQYMPLDNQPENSNHNQPHHGV 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0070 542 Gene3D - 5 99 - -
Lal14g0070 542 Pfam PA domain 13 76 IPR003137 -
Lal14g0070 542 SMART egfca_6 429 471 IPR001881 GO:0005509
Lal14g0070 542 Gene3D Glutaredoxin 179 313 - -
Lal14g0070 542 ProSitePatterns Calcium-binding EGF-like domain signature. 429 455 IPR018097 GO:0005509
Lal14g0070 542 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN, THIOREDOXIN-LIKE PROTEIN-RELATED 12 520 - -
Lal14g0070 542 CDD EGF_CA 429 460 - -
Lal14g0070 542 Gene3D Laminin 323 368 - -
Lal14g0070 542 Gene3D Laminin 383 467 - -
Lal14g0070 542 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 12 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0070 Lal-Chr14 841204 852462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0070 12 537 Miscellaneous Gene Families AT2G30290 70.152 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0070 - - gmx:100807869 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0070 14 841204 852462 Lal14g0070 14 841204 852462 ECH
Lal2g1974 2 21913881 21920824 Lal14g0070 14 841204 852462 PCT
Lal14g0070 14 841204 852462 Lal2g1974 2 21913881 21920824 PCT