Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1659 ATGGGTCTCTTAGGTTTGTGGGGTTTTGTTCCATTTATCCTATGTTTCTTAGTCTTAGCATATGTTCCTTATCAAACACATGCTTCAAGCCGTAGCTCCATTAGCAGAAAAAACCTTGTTCTTGACCCTTCATTGAAAGGTTTATGTGCCTCTGTTGTCATTGGTCATGGCTATAAATGCCATGAACTTGAAGTTACAACCAAAGATGGGTACATTCTTAGCCTGCAAAGGATCCCAGAAGGTAGGTATGAGAGTGGAGGCATTGGTACTAAGAAACAACCAGTGATAATACAACATGGAGTATTGGTGGATGGAATGACATGGTTTATGAACTCTCCAGAACAAAACCTACCCATGATTCTAGCAGATAGTGGCTTTGATGTGTGGATTGTTAATTCTAGAGGAACCAGATATAGCCGTAGACACATTTCTCTAGATCCCTCTAGTGAGGAGTTTTGGAATTGGTGTTTGGATGATCTTGTTTCATATGATCTCACTGCTGTTTTTGATTTTGTGTACAACCAAACAGACCAGAAGATCCATTACGTGGGTCATTCTTTGGGAACTTTGATGGCTTTGACATCATTCTCAGAGAGGCAATTGGTGCATCAGGTGAAATCTGCAGCCTTGTTGTCCCCAGTGGCCTTTTTGAGTCACATGAAAACTGCACTTGTAGTTCTTGCTGCCAGGTCCTTGCTTAGTGAGACTTTCACCCTACTCAGAGTAGCAGAATTTAATCCTACAGGGGTACTTGTCAAAGGGTATGTTAGGTCAATTTGTGCTTTCCCTGGGGTAGACTGCGATGACCTGTTGGGTGCAATCACTGGTCCAAATTGTTGCCTAAATTCTTCAGCAGTTGATCAATTATTGTCACATGAAAACCTTCAACCTACATCAACAAAGAACATGGTGCACTTAGCTCAAATTGTTAGATATGGGGTTTTGGCAAAATACAACCATATGGAACCAAAACATATTATCCAGAATCCAGAACATATATTCCCACAAAACTACTATAACCTTTCAAATATCCCTCATGACCTTCCTCTCTTCCTTAGCTATGGTGGCAAAGACGCCCTCTCCGATGTCGCCGATGTTCATAATCTGATCGACAGATTAAAATCTCATGATGTTGATAAGCTAAATGTTCAGTACATCAAGGATTATGCTCATGCCGATCACATAATGGCTCTCAATGCCAAGAACATAGTGTACAATGCTATTGTAACATTTTTCAAGAATCAATAA 1248 0.4046 MGLLGLWGFVPFILCFLVLAYVPYQTHASSRSSISRKNLVLDPSLKGLCASVVIGHGYKCHELEVTTKDGYILSLQRIPEGRYESGGIGTKKQPVIIQHGVLVDGMTWFMNSPEQNLPMILADSGFDVWIVNSRGTRYSRRHISLDPSSEEFWNWCLDDLVSYDLTAVFDFVYNQTDQKIHYVGHSLGTLMALTSFSERQLVHQVKSAALLSPVAFLSHMKTALVVLAARSLLSETFTLLRVAEFNPTGVLVKGYVRSICAFPGVDCDDLLGAITGPNCCLNSSAVDQLLSHENLQPTSTKNMVHLAQIVRYGVLAKYNHMEPKHIIQNPEHIFPQNYYNLSNIPHDLPLFLSYGGKDALSDVADVHNLIDRLKSHDVDKLNVQYIKDYAHADHIMALNAKNIVYNAIVTFFKNQ 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1659 415 SUPERFAMILY alpha/beta-Hydrolases 56 413 IPR029058 -
Lal13g1659 415 Pfam Partial alpha/beta-hydrolase lipase region 53 111 IPR006693 GO:0006629
Lal13g1659 415 PANTHER LYSOSOMAL ACID LIPASE-RELATED 12 415 - -
Lal13g1659 415 PIRSF Steryl_ester_lip 12 415 IPR025483 GO:0016788
Lal13g1659 415 Gene3D alpha/beta hydrolase 38 414 IPR029058 -
Lal13g1659 415 PANTHER TRIACYLGLYCEROL LIPASE 2 12 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1659 Lal-Chr13 16351391 16356044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1659 32 415 Acyl Lipid Metabolism Gene Families AT2G15230 36.317 5.92e-86 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1659 K01052 - gmx:100779460 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1659 13 16351391 16356044 Lal13g1659 13 16351391 16356044 ECH
Lal8g1423 8 18357346 18357810 Lal13g1659 13 16351391 16356044 PCT
Lal10g0135 10 1532219 1546036 Lal13g1659 13 16351391 16356044 PCT