Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0135 ATGTTAATGGGTTTTGTTGCATTCACCCTTTCTCTCTTACTCTTACCATTTATACTTCTTCATCAAGTACATGCTTCAAGCCATGGTACAAATTATGTTACTACTAATGTGGATGGTATATGCACCTCTTCTGTTATTATCCATGGATACAAGTGCCAAGAACTCGTAGTTACAACTAAAGATGGCTACATTCTTAGCTTGCAAAGGATTCCAGAAGGTAGGGGTGAAGTTAGTGGCACTCGGACTAAGAAGCAACCAGTGATTTTACAACATGGAGTTCTAGTGGATGGTATGACATGGCTATTGAACCCTCCGGAAGAAGACCTACCATTGATTTTGGCTGATAATGGATTTGATGTGTGGATTGCTAATACTAGAGGAACAAGATATAGTCGTAGACATATCTCATTGGACCCTTCTAATCCGGCCTTTTGGAATTGGTCATGGGATGAACTAGTTGCTTATGATCTACCTGCAGTGTTTGATTATGTCTTCAAGCAAACAAGCCAAAAAATTCATTATGTGGGCCATTCTCTGGGGACTTTGATAGCTTTGGCTTCATTATCTGAAGGGAAATTGGTGAAAGAAGTGAAATCAGCAGCATTGTTAAGTCCAATTGCTTATTTGAGTCACATGAACACAGCACTTGGAGTTGTTGCAGCCAAAACCTTTGTTGCTGAGTTCACTACTCTATTTGGTTTGGCAGAGTTTAATCCCAGAGGGTTACATGTTCATGCACTTCTTCATTCTCTCTGTGCTTACCCTGGAATAGATTGCTATGACTTGTTGACTTCACTCACTGGTAAAAATTGTTGTCTCAATTCTTCAACTGTCGATCTATTCTTAAGGAATGAACCTCAATCAACATCAACAAAAAACTTAGTGCACTTGTCTCAGACTGTTAGAGATGGGTTTCTATCAAAATTCAATTATGTGAAACCATCATACAATTATATGCATTACGGAGAAGTATTCCCTCCAATCTATAACCTTTCCAATATCCCTCATGATATTCCTCTTTTCATTAGCTATGGAGGCAAAGATGCACTTTCTGATGTTCATGATGTTGGAAACTTACTTGATTCCCTTAAGTTCCATGATGTGGATAAGCTAAGTGTTCAATTCATCAAGGACTATGCTCATGCTGATTATATCATGGGGATCAATGCTAGGGACATAGTCTATAATGTTGTTCTTTCATTTTTCAACCAAACATTTGATAGATAA 1227 0.3814 MLMGFVAFTLSLLLLPFILLHQVHASSHGTNYVTTNVDGICTSSVIIHGYKCQELVVTTKDGYILSLQRIPEGRGEVSGTRTKKQPVILQHGVLVDGMTWLLNPPEEDLPLILADNGFDVWIANTRGTRYSRRHISLDPSNPAFWNWSWDELVAYDLPAVFDYVFKQTSQKIHYVGHSLGTLIALASLSEGKLVKEVKSAALLSPIAYLSHMNTALGVVAAKTFVAEFTTLFGLAEFNPRGLHVHALLHSLCAYPGIDCYDLLTSLTGKNCCLNSSTVDLFLRNEPQSTSTKNLVHLSQTVRDGFLSKFNYVKPSYNYMHYGEVFPPIYNLSNIPHDIPLFISYGGKDALSDVHDVGNLLDSLKFHDVDKLSVQFIKDYAHADYIMGINARDIVYNVVLSFFNQTFDR 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0135 408 Pfam Partial alpha/beta-hydrolase lipase region 46 103 IPR006693 GO:0006629
Lal10g0135 408 Pfam alpha/beta hydrolase fold 104 384 IPR000073 -
Lal10g0135 408 PANTHER TRIACYLGLYCEROL LIPASE 2 17 404 - -
Lal10g0135 408 PANTHER LYSOSOMAL ACID LIPASE-RELATED 17 404 - -
Lal10g0135 408 SUPERFAMILY alpha/beta-Hydrolases 48 403 IPR029058 -
Lal10g0135 408 PIRSF Steryl_ester_lip 3 406 IPR025483 GO:0016788
Lal10g0135 408 Gene3D alpha/beta hydrolase 31 404 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0135 Lal-Chr10 1532219 1546036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0135 37 403 Acyl Lipid Metabolism Gene Families AT2G15230 38.859 3.29e-90 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0135 K01052 - gmx:100779460 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0135 10 1532219 1546036 Lal10g0135 10 1532219 1546036 ECH
Lal8g1423 8 18357346 18357810 Lal10g0135 10 1532219 1546036 LSH
Lal10g0135 10 1532219 1546036 Lal13g1659 13 16351391 16356044 PCT