Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1652 ATGGCTGCTTCATCAACCTTCTCCAACCTTCTCTCTCTCATCTTACCCACAAAGCAATCTTCTATTCCATCACCACCCCACAACCTCAATTTCTCTCTTTCATCAACCCCACTTCAAAAAATCTCTTCTTTTTCTCATGACTTTTCCTCTGTGATGAATCCCTCACTTGCTTATTCGAACACGTTGTTGTTTAAATCAGCGTATAATGTTCAGGTTGTGGTGGGAGATGATGAACCTGAAGAGAGGTTGTTGAATAGGTTCAGGAGAGAAGTGATGAAAGCTGGTGTTATACAAGAGTGTAAAAGGAGAAGGTACTATGAGAATAAACATGATAAGAAGAAGCGAAAGGCTCGTGATGCTGCTAAGCGTAATCGTAAATGGTGA 384 0.4089 MAASSTFSNLLSLILPTKQSSIPSPPHNLNFSLSSTPLQKISSFSHDFSSVMNPSLAYSNTLLFKSAYNVQVVVGDDEPEERLLNRFRREVMKAGVIQECKRRRYYENKHDKKKRKARDAAKRNRKW 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1652 127 MobiDBLite consensus disorder prediction 107 127 - -
Lal13g1652 127 Gene3D Ribosomal protein S8 84 122 IPR038380 -
Lal13g1652 127 Hamap 30S ribosomal protein S21 [rpsU]. 69 125 IPR001911 GO:0003735|GO:0005840|GO:0006412
Lal13g1652 127 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 17 126 IPR001911 GO:0003735|GO:0005840|GO:0006412
Lal13g1652 127 MobiDBLite consensus disorder prediction 104 127 - -
Lal13g1652 127 TIGRFAM S21p: ribosomal protein bS21 70 126 IPR001911 GO:0003735|GO:0005840|GO:0006412
Lal13g1652 127 PRINTS Ribosomal protein S21 family signature 73 81 IPR001911 GO:0003735|GO:0005840|GO:0006412
Lal13g1652 127 PRINTS Ribosomal protein S21 family signature 81 90 IPR001911 GO:0003735|GO:0005840|GO:0006412
Lal13g1652 127 PRINTS Ribosomal protein S21 family signature 93 103 IPR001911 GO:0003735|GO:0005840|GO:0006412
Lal13g1652 127 PRINTS Ribosomal protein S21 family signature 105 115 IPR001911 GO:0003735|GO:0005840|GO:0006412
Lal13g1652 127 PANTHER PROTEIN S21 FAMILY PROTEIN, PUTATIVE-RELATED 17 126 - -
Lal13g1652 127 Pfam Ribosomal protein S21 71 125 IPR001911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1652 Lal-Chr13 16321768 16322151 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1652 - - lang:109335213 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1652 13 16321768 16322151 Lal13g1652 13 16321768 16322151 ECH
Lal25g1181 25 15329270 15331641 Lal13g1652 13 16321768 16322151 PCT
Lal13g1652 13 16321768 16322151 Lal25g1181 25 15329270 15331641 PCT