Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1061 ATGGCTTCAGATTCCAACTCAATCCTTAGAATCATCATTGAAACCAATCCTCCCAAATCACGCTTAGAAGAATTGAATATCAAGTACTGGCCCAAATGGGCAGGACCTCCAGGGAAGTATGATGTAAAGTATGAAGCAGAAGAGATATGTTATTTTGTGAAAGGGAAAGTGAAAGTATACCCAAGACCAAGAAAATCATCATCAGAGTTTGTAGAATTTGGTGCTGGTGATCTTGTGATTTTTCCAAAAGGACTTAGTTGCACTTGTGAGGTATCTATTGCTGTCGACAAATACTACAAATTTGAGCCACCATGTTCTTCATCATCACCATCATCATCATCGTCGTCTTTTTAG 354 0.387 MASDSNSILRIIIETNPPKSRLEELNIKYWPKWAGPPGKYDVKYEAEEICYFVKGKVKVYPRPRKSSSEFVEFGAGDLVIFPKGLSCTCEVSIAVDKYYKFEPPCSSSSPSSSSSSF 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1061 117 Pfam EutQ-like cupin domain 22 99 IPR008579 -
Lal13g1061 117 CDD cupin_TM1112-like 30 101 - -
Lal13g1061 117 Gene3D Jelly Rolls 2 101 IPR014710 -
Lal13g1061 117 PANTHER OS04G0445200 PROTEIN 3 103 - -
Lal13g1061 117 PANTHER OS02G0620400 PROTEIN 3 103 - -
Lal13g1061 117 SUPERFAMILY RmlC-like cupins 24 91 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1061 Lal-Chr13 7866889 7867676 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1061 - - gmx:100500522 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1061 13 7866889 7867676 Lal13g1061 13 7866889 7867676 ECH
Lal11g1101 11 14690451 14691474 Lal13g1061 13 7866889 7867676 PCT
Lal13g1061 13 7866889 7867676 Lal11g1101 11 14690451 14691474 PCT