Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1101 ATGGCTTCAGATTCTAACCCAAATCTTAGAATCACAATTGAAAGAAATCCCTCTCAGTCACGGTTAGATGAATTGAACATCAAATGTTGGCCCAAAATCGCAAATATTGTTCGACGAGACAATCTTATTCGAGTCAGATGGGGTTGTTCACCAGGGAAGTATCAGTTAAAGTTTGATGCAGAAGAGACATGTTATTTGTTGAAAGGAAAAGTGAAAGCATACCCAAAAGGTTCAACAGATTTTGTAGAATTTGGAGCTAGAGATCTTGTTACAATTCCAAAAGGAATGAGTTGTACTTGGGATGTATCTGTTGCTGTTGATAAGTACTATAAATTTGAATCAACTACTTCTTTTTTATCATCATCTTCTTCATCTTCTTAG 381 0.3543 MASDSNPNLRITIERNPSQSRLDELNIKCWPKIANIVRRDNLIRVRWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSTDFVEFGARDLVTIPKGMSCTWDVSVAVDKYYKFESTTSFLSSSSSSS 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1101 126 SUPERFAMILY RmlC-like cupins 33 110 IPR011051 -
Lal11g1101 126 CDD cupin_TM1112-like 47 112 - -
Lal11g1101 126 Gene3D Jelly Rolls 2 112 IPR014710 -
Lal11g1101 126 PANTHER OS04G0445200 PROTEIN 7 118 - -
Lal11g1101 126 PANTHER RMLC-LIKE CUPINS SUPERFAMILY PROTEIN 7 118 - -
Lal11g1101 126 Pfam EutQ-like cupin domain 47 110 IPR008579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1101 Lal-Chr11 14690451 14691474 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1101 - - gmx:100793722 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1101 11 14690451 14691474 Lal11g1101 11 14690451 14691474 ECH
Lal11g1101 11 14690451 14691474 Lal13g1061 13 7866889 7867676 PCT
Lal13g1061 13 7866889 7867676 Lal11g1101 11 14690451 14691474 PCT