Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0430 ATGTCTTGTGCAAGTTTCGCAAAACTCAACATTTTGATCGGCAACAACTCTTTCTCTTCCCGCCGTGGCGGATCCTCACCTCTAACCGCCACTCGCCGAGTCTCCCTCCCGATCCGCGCTTCTTCTTACTCTGACGAACTCGTCCAAACCGCTAAAACAATTGCATCTCCTGGTCGTGGAATTCTTGCGATTGATGAGTCAAATGCAACCTGTGGGAAGCGGTTAGCATCCATTGGATTGGACAATACCGAGGTGAACCGTCAAGCTTACAGGCAACTTCTTCTGACCACACCTGGACTTGGTGAATACATTTCCGGTTCCATCCTTTTTGAGGAAACCCTTTACCAGTCAACAACTGGTGGAAAGAAGTTTGTGGATTGCCTTCGTGAGGAGAATATTGTACCTGGTATCAAAGTTGACAAGGGTTTGGTACCACTACCAGGGTCAAACAATGAATCTTGGTGCCAAGGGTTAGATGGACTGGCTTCAAGATCTGCTGAATACTACAAGCAAGGTGCTCGATTTGCCAAGTGGCGCACAGTTGTTAGCATTCCTTCCGGTCCTTCTGCATTGGCTGTTAAGGAAGCTGCATGGGGACTTGCTCGTTATGCTGCTATCTCTCAGGACAACGGTCTTGTTCCAATTGTAGAGCCTGAAATTCTTCTTGATGGGGATCACCCAATTGAGAGGACACTGGAAGTGGCAGAGAAGGTCTGGTCAGAAGTTTTCTTCTATTTGGCGCAAAACAATGTCCTTTTTGAGGGAATTTTGCTCAAACCTAGCATGGTGACACCTGGGGCTGAACACAAGCAAAAGGCTTCTCCAGAAACCATAGCCAAGCATACACTAACCATGCTTAGAAGAAGAGTTCCCCCTGCTGTCCCAGGAATCATGTTTTTGTCTGGTGGACAATCTGAAGTGGAAGCAACACTAAATCTTAATGCAATGAACCAAAGTCCCAACCCATGGCATGTTTCATTCTCCTATGCACGAGCTCTGCAGAACTCTGTGCTTAAGACATGGCAAGGACAACCCGAGAATGTGGAAGCTGCTCAGAAGTCTCTTTTGATTCGTGCAAAAGCAAACTCCTTGGCTCAACTTGGAAGATACTCTGCGGAGGGTGAAAATGAAGAAGCCAGGAAGGGAATGTTCGTCAAGGGCTACACCTACTAA 1173 0.4723 MSCASFAKLNILIGNNSFSSRRGGSSPLTATRRVSLPIRASSYSDELVQTAKTIASPGRGILAIDESNATCGKRLASIGLDNTEVNRQAYRQLLLTTPGLGEYISGSILFEETLYQSTTGGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPSGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVLFEGILLKPSMVTPGAEHKQKASPETIAKHTLTMLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNSVLKTWQGQPENVEAAQKSLLIRAKANSLAQLGRYSAEGENEEARKGMFVKGYTY 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0430 390 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 29 390 - -
Lal13g0430 390 Pfam Fructose-bisphosphate aldolase class-I 46 390 IPR000741 GO:0004332|GO:0006096
Lal13g0430 390 SUPERFAMILY Aldolase 37 390 - -
Lal13g0430 390 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 251 261 IPR029768 -
Lal13g0430 390 Gene3D Aldolase class I 28 389 IPR013785 -
Lal13g0430 390 CDD FBP_aldolase_I_a 44 370 - -
Lal13g0430 390 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 29 390 IPR000741 GO:0004332|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0430 Lal-Chr13 2692533 2695692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0430 41 390 Miscellaneous Gene Families AT3G52930 55.650 2.29e-134 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0430 K01623 - rcu:8275109 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0430 13 2692533 2695692 Lal13g0430 13 2692533 2695692 ECH
Lal12g0433 12 3041788 3046235 Lal13g0430 13 2692533 2695692 LSH