Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0433 ATGTCTTGTGTTAGTTTCGCAAAACTCACCACTTTGTCGCCTCATTGGATCGCCCACAACTCATTCTCTCCCCGCCGCCACGGATCATCCCCTCTCTCCGCCACCCGCCGAGTCTCCCTTCCGATCCGCGCTAGTTCTTACTCCGATGAACTTGTTCAAACCGCTAAAACTATTGCATCTCCTGGTCGTGGAATTCTTGCGATTGATGAGTCAAATGCAACCTGTGGAAAGCGGTTAGCATCCATTGGATTGGACAATACTGAGGTGAATCGTCAAGCCTACAGGCAACTTCTGCTGACCACACCTGGCCTTGGTGAATACATTTCCGGTTCTATCCTTTTCGAGGAAACCCTTTACCAGTCAACAACAGATGGAAAGAAGTTTGTGGATTGCCTCCGCGAGCAGAAGATTGTACCTGGCATCAAAGTTGATAAGGGTTTGGTTCCTCTACCAGGTTCAAACAACGAATCTTGGTGCCAAGGGTTGGATGGATTGGCTTCAAGATCTGCTGAATACTACAAGCAAGGTGCTCGATTTGCCAAGTGGCGGACAGTTGTTAGCATTCCATGTGGTCCCTCTGCATTAGCTGTTAAGGAAGCTGCATGGGGACTTGCACGTTATGCTGCTATCTCTCAGGACAATGGTCTTGTTCCAATCGTAGAGCCTGAAATTCTTCTTGATGGGGACCACCCAATTGAGAGGACACTGGAAGTGGCAGAGAAGGTCTGGTCAGAAGTTTTCTTCTATTTGGCTCAAAACAATGTCCTTTTTGAGGGAATTTTACTCAAACCTAGCATGGTGACACCCGGGGCTGAGCACAAGGAAAAGGCTTCTCCAGAAACCATTGCCAAACATACATTAACAATGCTTAGAAGAAGAGTTCCTCCTGCTGTCCCTGGAATCATGTTCTTGTCTGGTGGACAATCTGAAGTGGAAGCAACACTAAATCTTAATGCAATGAACCAAAGTCCCAACCCATGGCATGTTTCATTCTCCTATGCACGAGCTCTGCAGAACTCTGTGCTTAAGACATGGCAAGGACGCCCCGAGAATGTGGAAGCCGCTCAGAAATCTCTTTTGGTGCGTGCAAAGGCAAACTCCTTGGCCCAACTTGGAAGATACTCTGCGGAGGGTGAAAACGAAGAAGCCAGGAAGGGAATGTTTGTCAAGGGCTATACCTACTAA 1185 0.4785 MSCVSFAKLTTLSPHWIAHNSFSPRRHGSSPLSATRRVSLPIRASSYSDELVQTAKTIASPGRGILAIDESNATCGKRLASIGLDNTEVNRQAYRQLLLTTPGLGEYISGSILFEETLYQSTTDGKKFVDCLREQKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVLFEGILLKPSMVTPGAEHKEKASPETIAKHTLTMLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNSVLKTWQGRPENVEAAQKSLLVRAKANSLAQLGRYSAEGENEEARKGMFVKGYTY 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0433 394 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 29 394 IPR000741 GO:0004332|GO:0006096
Lal12g0433 394 SUPERFAMILY Aldolase 41 394 - -
Lal12g0433 394 Gene3D Aldolase class I 32 393 IPR013785 -
Lal12g0433 394 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 29 394 - -
Lal12g0433 394 CDD FBP_aldolase_I_a 48 374 - -
Lal12g0433 394 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 255 265 IPR029768 -
Lal12g0433 394 Pfam Fructose-bisphosphate aldolase class-I 50 394 IPR000741 GO:0004332|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0433 Lal-Chr12 3041788 3046235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0433 45 394 Miscellaneous Gene Families AT3G52930 56.215 4.93e-135 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0433 K01623 - gmx:100786504 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0433 12 3041788 3046235 Lal13g0430 13 2692533 2695692 LSH