Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0235 ATGATTCAATATATGGTACGGACCATTGAACCTCCGATTCAATCCAATCTGGTAGTTGCTCGCTTGTACTCACAGAACATGTCTGATGAACGAGATGTGCACCCTGATTGCCGTAATGCCACTAATCCTTACCATCAATGCACTGATTACTGCTTTCGGATTATAGCTGAAACCAAAATCAGGATTCAGCAATATCTTCATTCGGAAGTTGCACAAGGTAGTGGTGGAAGTAGTAGTAAGCAAGCCATCCCAGATGAAGATGTTCATAATGAAAGACCCAAACTTGAAGAAAATTCTGATAGTGATCCTGACCAGCCTTCCGAGAAGGAAGTGGAGGTTGACTACACAAAACTCACCGGGAGACAGAAAAAGTGGATGGAGTTGAGAGCCAAGATGCAAGAAGCAAAAAAACGTAATCAAGTTGAAATAGCTGCTGAAAAGAAGAGGATGGAAGGTCCAACAGAGTCTAGGGGTGTTTCTAAACAGAAGTGGCTTGAGGACAGGAAGAAAAAGATAGGAAAACTTCTTGACGCAAATGGATTGGATATGACAAAGGCTTATATGCTTGACACACAAGAGGCAGCAGAAGTGAAATACAAGAAATGGGAGAAGGATCCTGCTCCTTCTGGCTGGGATGTTTTTAACCAGAAGACGTTATACAATGCATACAAAAAGCGGAGCAGCAAAATTGAGGTTGATGTTGAAGAATACAATAGAATGAAAGATGCTGATCCAGAGTTCTACCGTGAAGCCACAAGTCTCCAGTATGGAAAGGCACCAAAAATCTCAGAGGACAAGATTGATAGAATGGTACAGGAGCTAAAGGATAGGGATGAGAAGCGCAATTCATTTAGCAGGAGAAGACGATTTCATGAAGAGAAGGATATTGACTCAATCAATGACCGCAATGAGCATTTCAACAAGAAGATTGAGCGAGCCTTCGGTAAATACACACTGGAAATTAAAAATAATCTTGAGCGAGGAACTGCCTTGCCTGACTAA 1002 0.4182 MIQYMVRTIEPPIQSNLVVARLYSQNMSDERDVHPDCRNATNPYHQCTDYCFRIIAETKIRIQQYLHSEVAQGSGGSSSKQAIPDEDVHNERPKLEENSDSDPDQPSEKEVEVDYTKLTGRQKKWMELRAKMQEAKKRNQVEIAAEKKRMEGPTESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEVKYKKWEKDPAPSGWDVFNQKTLYNAYKKRSSKIEVDVEEYNRMKDADPEFYREATSLQYGKAPKISEDKIDRMVQELKDRDEKRNSFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0235 333 MobiDBLite consensus disorder prediction 84 116 - -
Lal13g0235 333 Pfam SYF2 splicing factor 179 326 IPR013260 -
Lal13g0235 333 PANTHER PRE-MRNA-SPLICING FACTOR SYF2 27 333 - -
Lal13g0235 333 PANTHER GCIP-INTERACTING PROTEIN P29 27 333 IPR013260 -
Lal13g0235 333 MobiDBLite consensus disorder prediction 276 302 - -
Lal13g0235 333 MobiDBLite consensus disorder prediction 70 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0235 Lal-Chr13 1494584 1497071 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0235 K12868 - gmx:100811651 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0235 13 1494584 1497071 Lal13g0235 13 1494584 1497071 ECH
Lal12g0266 12 1900176 1902778 Lal13g0235 13 1494584 1497071 LSH