Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0266 ATGTCTGGCGAACGAGATGTGCACCCTCATTGCAGGAATGCCACTAATCCTTACCATGAATGCACTGATTACTGCTTTAGAGTCATAGCTGAAGCCAAACTCAGCATTCAAAAACAACAGGAATCAGAAGTTGCACAAGCTAGTGGTGGAAGTAGCAGCAAGCAAGCCATCCCAGATCATTCATATCCGGATGAAGACATACATGATGAGAGACCCAAACTTGAAGAAAATTCTGATAGTGATCCCGACCAGCCTGCTGAGCAGGAAGTGGAGGTTGACTACACAAAACTTACCGGGAGACAGAAAAAGTGGATGGAGCTGAGAGCCAAGATGCAAGAAGCAAAAAAACGTAATCAAGTTGAAATAGCTGCTGAAAAGAAGAGGATGGAATCTCCAACAGAGTCTAGGGGCGTTTCTAAACAGAAGTGGCTCGAGGACAGGAAGAAAAAGATCGGAAAACTTCTCGATGCAAATGGATTGGATATGACAAAGGCATATATGCTTGACACACAAGAGGCAGCAGAAGTGAAATACAAGAAATGGGAGAAGGATCCTGCTCCATCCGGCTGGGACGTTTTTAATCAGAAGACGTTATACAATGCATACAAAAAGCGGAGCAGCAAAATCAAGGTTGATGTAGAAGAATACAATAGAATGAAAGAAGCTGATCCAGAGTTCTATCGTGAAGCCACAAGTCTCCAGTATGGAAAGGCACCAAAAATCTCAGAGGACAAGATTGACAGGATGGTTCAGGAGCTAAAGGATAGGGATGAGAAGCGCAATTCATTTAGCAGGAGAAGACGATTCCATGAAGAGAAAGATATTGACTCAATCAATGACCGTAATGAGCATTTCAACAAGAAGATTGAGCGAGCCTTTGGGAAATACACACTGGAAATTAAAAATAACCTTGAGCGAGGAACTGCCTTGCCTGACTAA 939 0.4313 MSGERDVHPHCRNATNPYHECTDYCFRVIAEAKLSIQKQQESEVAQASGGSSSKQAIPDHSYPDEDIHDERPKLEENSDSDPDQPAEQEVEVDYTKLTGRQKKWMELRAKMQEAKKRNQVEIAAEKKRMESPTESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEVKYKKWEKDPAPSGWDVFNQKTLYNAYKKRSSKIKVDVEEYNRMKEADPEFYREATSLQYGKAPKISEDKIDRMVQELKDRDEKRNSFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0266 312 PANTHER PRE-MRNA-SPLICING FACTOR SYF2 1 312 - -
Lal12g0266 312 Pfam SYF2 splicing factor 158 305 IPR013260 -
Lal12g0266 312 MobiDBLite consensus disorder prediction 256 281 - -
Lal12g0266 312 MobiDBLite consensus disorder prediction 59 80 - -
Lal12g0266 312 MobiDBLite consensus disorder prediction 37 95 - -
Lal12g0266 312 MobiDBLite consensus disorder prediction 37 58 - -
Lal12g0266 312 MobiDBLite consensus disorder prediction 115 141 - -
Lal12g0266 312 PANTHER GCIP-INTERACTING PROTEIN P29 1 312 IPR013260 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0266 Lal-Chr12 1900176 1902778 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0266 K12868 - gmx:100787714 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0266 12 1900176 1902778 Lal12g0266 12 1900176 1902778 ECH
Lal12g0266 12 1900176 1902778 Lal13g0235 13 1494584 1497071 LSH