Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0190 ATGTTATCGAAAACCCACAAAACTATATTCTCTCATTTCCACAACAACCCTAATCTCAATGTCGACCTCAACCTTATTCTAACAAGAACCATTTCTAGCCTCAAAGTGGAGTGGCGCAAAGACCAAAACCTCGACAAGGCCATCGAAAATGATAAGCGTTACAATCAATGCGCACGTGTCGTTAAAGAGGTCCTCAACGAACCTGGTCAAGTTATCCCTCTCCACTTCCTCAAAAAACGCCGAGAAAGGATGCGACTCAAGGTTCAAGTCCAAACCTTTTTAAATCAAAACCCTGGTTTATTTGATGTATACTATGACAGAGTTAAACCCAAAACCGAACCGGTTCGGTTTCTCCGGGTCACTGACCGGCTTCAGAACTTTCTAGAAGAAGAAAAAAGAATCTTTAAGGAAAATGAGAACTTTATTGTCTCCAAGTTGTGTAAACTGTTGATGATGTCTAAGGATAAGGTTGTCAGTGCTGATAAGTTGCTTCATGTTAAGAGGGAATTTGGTTTCCCTAACGATTTTTTGGTTGATATTGTTCCTAGGTACCCGCAGTATTTTAGGCTAACTGGTTTTCCTGGTGAAGGAAAATCGTTTCTAGAATTGGTATCTTGGGAGCCGGAGTTTGCGAAATCGGTTATTGAGCAACGGGCTGATGAGGAGAGTAAGTCTACAGGGATAAGGGTTAGGCCTGGTTTCAATGTGAAGCTTCCACCAGGATTTGTGTTGAAGAAAGAGATGAGGGAGTGGGTTAGGGATTGGATGGATCTTGATTACATATCGCCATATGAGGATGTATCACATTTGGATCAAGCTTCGAGAGAGATGGAGAAGAGGTCAGTTGGTGTGTTCCATGAGCTGCTCTCACTTTCATTGTATAAGAGGGTTCCAGTTCCGATTTTGGGGAAGTTTTGTGATGAGTATAGGTTTTCAAATGCATTTTCTAGTGTTTTTACAAGGCACTCAGGCATTTTTTATATGTCATTGAAAGGAGGGATAGAAACAGCGGTGTTGAGAGAAGCATACAGAGGTGATAAATTGATTGATCTGGATCCACTGCTTGAGATAAAAGATAAATTCAACGACTTGTTGGAGGAGGGTTGGCAGCAAAGAAAAGAGCAGCTGAGGTTGAACCAAGAGAAAATTAAGAAAGACATGAAAGTTTTGGCCTTGAAAGTTAGTGAGTAG 1191 0.4123 MLSKTHKTIFSHFHNNPNLNVDLNLILTRTISSLKVEWRKDQNLDKAIENDKRYNQCARVVKEVLNEPGQVIPLHFLKKRRERMRLKVQVQTFLNQNPGLFDVYYDRVKPKTEPVRFLRVTDRLQNFLEEEKRIFKENENFIVSKLCKLLMMSKDKVVSADKLLHVKREFGFPNDFLVDIVPRYPQYFRLTGFPGEGKSFLELVSWEPEFAKSVIEQRADEESKSTGIRVRPGFNVKLPPGFVLKKEMREWVRDWMDLDYISPYEDVSHLDQASREMEKRSVGVFHELLSLSLYKRVPVPILGKFCDEYRFSNAFSSVFTRHSGIFYMSLKGGIETAVLREAYRGDKLIDLDPLLEIKDKFNDLLEEGWQQRKEQLRLNQEKIKKDMKVLALKVSE 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0190 396 Pfam Plant organelle RNA recognition domain 40 369 IPR021099 GO:0003723
Lal13g0190 396 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 24 390 - -
Lal13g0190 396 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 24 390 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0190 Lal-Chr13 1188456 1189646 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0190 - - lang:109336290 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0190 13 1188456 1189646 Lal13g0190 13 1188456 1189646 ECH
Lal11g1304 11 16691212 16700325 Lal13g0190 13 1188456 1189646 PCT
Lal13g0190 13 1188456 1189646 Lal11g1304 11 16691212 16700325 PCT