Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1304 ATGAACCATTTAAGAAACAATAAATACCCTTTTCTCCATTTCCACAATCTGTATCAGCAGCAATGCAGAACCATTGTCAAAGTTCGTCTTAAGTGGGTTAAAAATCGAAGCTTGGATCACATTATTGACAAAGAAACCGATTTGAAAGCTGCTTCTCTTCTCAAAGACGCTATCAAACGTTCCTCAACCGGTTTCCTAACCGAAAAAACCGTCGCCGATTGGCAAAAGCTTCTTGGCCTCACCGTCCCTGTTCTCCGATTTCTACGCCGTTACCCAACACTCTTTCATGAATTCCCTCACCCTCGTTGGAACTCCTTACCTTGTTTCCGTTTAACCGAATCGGCGCAGTTTTTGGATTCTCAGGAGCAAGAAATTTACTTGAATCACGAGAATGATAGTGTTGAAAGGGTTTGTAAGGTTCTTATGATGTTAAAGACTCGAACTTTACCGCTTCTGTCACTTCAACCTTTGAAATGGGATCTGGGTTTGCCTGATTCTTTTGAAAAAACCCTAATTCCCAAATACCCTCAATTTTTTCAATTAGTTAAGGCCTCGAATGGGGTTTCGTGTTTGAGATTGGTGAAATGGTGTGATGAATTTGCAGTTTCTGCATTGCAGAAGAGCAATGAGAAAAAAGGGTGTGAGAATGAGTATGTGGAATTTAAGAGAGGGCAAAAAGCTTTGGTTTTTCCAATGAGGTTTCCAAGAGGTTATGGTGCACAGAAAAAGGTTAGGGCTTGGATGGAAGAGTTTCATAAATTGCCTTATATATCACCCTATGTGGATTGTAAGAATATTGATCCTAATAGTGATTTGATGGAGAAGAGAGTTGTTGGGGTTCTTCATGAGTTTTTGAGTTTAACTATTCACAAGAAAACTAAGAGGAATTACTTGAGAAGTTTGAGGGAGGAGTTAAATCTTTCACATAAGTTTACCCGAATTTTTACAAGGTATCCAGGGATATTTTATCTGTCATTGAAGTGTAAAACAACTACTGTTACTCTTAGAGAAGGATATCAGAGTGGAAAGCTAGTAGATCCTCATCCGATTGCGCGTCATAGGGATAAATTCTACCATGTAATGCAGACGGGGCTTCTTTATCGCGCTAAAGGCAACTTGAGATCTGAGGAAGATGTTTTGATGTTGGATAATGTGGCGAAGGATGAAGCGGGGAATGTAGACTCCGAGGAGGAGGTTGAAACAAGCGATGAATTTTGCGAGGATGAAGTTTCGGAGACAGATGAAATGAGTGAATAA 1257 0.4002 MNHLRNNKYPFLHFHNLYQQQCRTIVKVRLKWVKNRSLDHIIDKETDLKAASLLKDAIKRSSTGFLTEKTVADWQKLLGLTVPVLRFLRRYPTLFHEFPHPRWNSLPCFRLTESAQFLDSQEQEIYLNHENDSVERVCKVLMMLKTRTLPLLSLQPLKWDLGLPDSFEKTLIPKYPQFFQLVKASNGVSCLRLVKWCDEFAVSALQKSNEKKGCENEYVEFKRGQKALVFPMRFPRGYGAQKKVRAWMEEFHKLPYISPYVDCKNIDPNSDLMEKRVVGVLHEFLSLTIHKKTKRNYLRSLREELNLSHKFTRIFTRYPGIFYLSLKCKTTTVTLREGYQSGKLVDPHPIARHRDKFYHVMQTGLLYRAKGNLRSEEDVLMLDNVAKDEAGNVDSEEEVETSDEFCEDEVSETDEMSE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1304 418 PANTHER OS04G0546100 PROTEIN 17 414 - -
Lal11g1304 418 MobiDBLite consensus disorder prediction 387 418 - -
Lal11g1304 418 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 17 414 IPR045040 GO:0003723
Lal11g1304 418 Pfam Plant organelle RNA recognition domain 33 364 IPR021099 GO:0003723
Lal11g1304 418 MobiDBLite consensus disorder prediction 393 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1304 Lal-Chr11 16691212 16700325 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1304 - - jcu:105648944 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1304 11 16691212 16700325 Lal11g1304 11 16691212 16700325 ECH
Lal11g1304 11 16691212 16700325 Lal13g0190 13 1188456 1189646 PCT
Lal13g0190 13 1188456 1189646 Lal11g1304 11 16691212 16700325 PCT