Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0083 ATGAACAACAACCTTCTCTTCTATCTTCTTCTTCTTCTTGCTTCCACACTATCTTCATCTTCTTCAGAAGACTTCAAGAACACTAGTTATGCGACTCGTGCAAGACATTTGTTGGAGGAAAATGAATCTCAGTCTCAGGAAATTGTTGATTTGGCACAAGGATACATGACCAATGCCGACCTTGAAAGGGCCATCAAGGAATTTGGTCAAAGGTGTAGCAACATTTCTAGGATATACAGGTTCTGCTTCTTGCATTTGTTTGTTTCCCTCTTTGAGGACTTCTTGGGACGGGCTATTAGTATTGGTAAGAGTGTGAATGGAGTTCCACTGTGGGTGATAGAGATTTCTGACAAGCCGGGGGAAGAAGAGACTGAACCTGCATTTAAGTATATTGGAAACGTGCATGGAGATGAACCCGTGGGCCGTGAGCTTCTTATTTTTCTGGCCAATTGGCTATGTGATAACCATTTGAAAGATCCTCTGGCAACATTAATTGTGGAGAACGTTCACCTTCATATCCTTCCATCAATGAATCCTGATGGGTTTAGTTTAAGAAGGCGCCATAATGCAAACAATATTGATCTGAATCGGGATTTTCCTGACCAGTTCTTCCCTGTAAATGATGATGAGGATTCCCGGCAACCTGAAACAAGAGCGATAATGAATTGGTTGAGAGATATACGATTTACAGCATCTGCCACTTTGCATGGGGGTGCACTTGTTGCAAATTATCCTTGGGATGGTACTGAAGATAAAAAGACAGATTACTATGGAACTCCTGATGATGATACATTTCGATTTATGGCAAGCATATATAGTCACTCTCACTATAACATGTTTTCAAGCAAGGAGTTTCCTGGTGGAATTACCAATGGAGCAGCTTGGTATCCTGTATATGGAGGAATGCAAGATTGGAACTATATACACGCTGGCTGTTTTGAATTGACCTTGGAAGTTAGTGACAATAAATGGCCTAATGCTGCTGAGCTTCCTATTATTTGGAGATATAACAAAATGAGCATGCTTAATCTTGTTGCAAGCCTTGTGAAGACAGGAGTGCATGGCAGAATATATTCTTCAGGTGATGGAAGGCCATTGCCAGGCTTTATAACTGTCAGTGGAATTAATTACACGGTTAGAGCTGGAATATTTTTTGCTGACTACCATCGCATACTTGCCCCAAGAGATAAATATCAAGTAGTGGCAACCATGCCTGGCTACAAATCAAAGAATACATCTATTTGGTTGGATGAAGGACCCATGACATTAGATTTTGTCCTTGAAGCTGAAGTCAGTGTTAAAGGGAGTGTACTACAAAATGTATATGATTGCAACTGTAACAGTAAATGCAGACAAGAATTTGTTCAATTTCTTTGGGGAGTCCACTTGGAACTTTACTTTGGTTTCATTCTTATCTTAGGGTTTTTCTGCTTATTGTTTCAGTGGAGAGTAAAGGCTAAATCTTCAAGAGCAAAAAGAATATTAGTGGTTTGA 1494 0.4003 MNNNLLFYLLLLLASTLSSSSSEDFKNTSYATRARHLLEENESQSQEIVDLAQGYMTNADLERAIKEFGQRCSNISRIYRFCFLHLFVSLFEDFLGRAISIGKSVNGVPLWVIEISDKPGEEETEPAFKYIGNVHGDEPVGRELLIFLANWLCDNHLKDPLATLIVENVHLHILPSMNPDGFSLRRRHNANNIDLNRDFPDQFFPVNDDEDSRQPETRAIMNWLRDIRFTASATLHGGALVANYPWDGTEDKKTDYYGTPDDDTFRFMASIYSHSHYNMFSSKEFPGGITNGAAWYPVYGGMQDWNYIHAGCFELTLEVSDNKWPNAAELPIIWRYNKMSMLNLVASLVKTGVHGRIYSSGDGRPLPGFITVSGINYTVRAGIFFADYHRILAPRDKYQVVATMPGYKSKNTSIWLDEGPMTLDFVLEAEVSVKGSVLQNVYDCNCNSKCRQEFVQFLWGVHLELYFGFILILGFFCLLFQWRVKAKSSRAKRILVV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0083 497 ProSitePatterns Zinc carboxypeptidases, zinc-binding region 1 signature. 126 148 IPR000834 GO:0004181|GO:0006508|GO:0008270
Lal13g0083 497 PANTHER PROTEASE M14 CARBOXYPEPTIDASE 97 418 - -
Lal13g0083 497 Pfam Zinc carboxypeptidase 97 337 IPR000834 GO:0004181|GO:0006508|GO:0008270
Lal13g0083 497 PANTHER CARBOXYPEPTIDASE D 97 418 IPR015567 GO:0004181|GO:0006518|GO:0008270
Lal13g0083 497 PRINTS Carboxypeptidase A metalloprotease (M14) family signature 101 113 IPR000834 GO:0004181|GO:0006508|GO:0008270
Lal13g0083 497 PRINTS Carboxypeptidase A metalloprotease (M14) family signature 126 140 IPR000834 GO:0004181|GO:0006508|GO:0008270
Lal13g0083 497 PRINTS Carboxypeptidase A metalloprotease (M14) family signature 192 200 IPR000834 GO:0004181|GO:0006508|GO:0008270
Lal13g0083 497 PRINTS Carboxypeptidase A metalloprotease (M14) family signature 233 246 IPR000834 GO:0004181|GO:0006508|GO:0008270
Lal13g0083 497 SMART zn_carb 73 329 IPR000834 GO:0004181|GO:0006508|GO:0008270
Lal13g0083 497 ProSitePatterns Zinc carboxypeptidases, zinc-binding region 2 signature. 236 246 IPR000834 GO:0004181|GO:0006508|GO:0008270
Lal13g0083 497 Gene3D Zn peptidases 47 349 - -
Lal13g0083 497 CDD M14_CP_plant 55 347 - -
Lal13g0083 497 SUPERFAMILY Zn-dependent exopeptidases 55 346 - -
Lal13g0083 497 SUPERFAMILY Carboxypeptidase regulatory domain-like 352 437 IPR008969 -
Lal13g0083 497 Gene3D - 352 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0083 Lal-Chr13 544709 552327 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0083 - K07752 gmx:100775772 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0100 12 676861 687825 Lal13g0083 13 544709 552327 LSH