Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0082 ATGGTCAACAAAGAAAGTCATGGACTTAGAGAAGGCAATGTGGTTGACCAAATAGCCGCATATGTGGAGTACTTCATTCAATTTACTTCAGAACAATTTGCTGATGATATTGCTGAGTTGATCCGAAACCGCTATCCATCAAAGGACATTCTTCTCTTTGATGATGTTTTGGCAACATTTGTTCTTCATCATCCTGAGCATGGGCATGAAGTTGTACTTCCAATTATTTCATGTATTATTGATGGTACACTAGTCTACGATAAGATCAGTCCTCCGTTTGCTTCTTTCATATCTTTAGTCTACCCAAAAAGTGAGAATGAATACTCAGAACAATGGGCTCTGGCGGTTGGTGAGATTTTGCGTATTTTAACTCATTATAATCGCCCTGTATACAAAATGGAAAGACAAAATGGTGAAACAGAAAGAAGTAGTAGTGGCAGTGATGCAACGACTAGTGACTCTGTTGCTGGGAAATCTGTCCAAAATTCTTTGACACAGAAAGAGAAGAAACCTACAAGACCCTTGTCCCCGTGGATTACTGATATATTGCTCGCTGCACCCGTAGGCATAAGAAGTGACTATTTCCGCTGGTGCAGTGGTGTTATGGGTAAATATGCTGCAGGAGAACTTAAGCCTCCAACAACTGCTTCTTCCCGTGGTTCTGGGAAGCATCCTCAACTTGTGCCTTCAACTCCAAGATGGGCTGTTGCTAATGGTGCTGGTGTTATATTAAGTGTTTGTGATGATGAAGTCGCTCGCAATGAGACTGCTACTTTAACAGCAGCTGCTGTACCTGCACTTTTGCTTCCTCCTCCAACAACTGCTCTGGATGAGCATTTAGTTGCTGGATTACCAGCTCTAGAACCATATGCACGTTTATTTCATAGATATTATGCCATTGCCACTCCAAGTGCTACACAGAGGCTTCTTCTTGGACTTCTAGAAGCACCCCCATCATGGGCTCCAGATGCACTTGATGCTGCTGTGCAGCTTGTGGAACTTCTACGAGCTGCTGAAGATTATGCTACTGGCATCAGGTTGCGTCGAGTTCATCCTCTCCCAATATTCTGTTTCATATGTGCATTTAAGTGGGATCACAAGCTACAGCTTCCTAGAAACTGGATGCATTTACATTTCTTGCGTGCAATAGGGACTGCAATGTCCATGAGAGCTGGTATAGCTGCTGATGCTGCAGCCGCTTTGCTTTTCCGTATACTTTCACAACCTGCGTTACTGTTTCCTCCTCTTAGGCAAGTTGATGGAGTTGAAGTCCAGCATGAACCTTTGGGTGGTTATATATCTTCCTATAAAAAGCAGATAGAAGTTCCTGCAGCTGAAGCATCTATTGAGGCCACTGCCCAAGGCATTGCATCAATGCTTTGTGCCCATGGTCCAGAGGTTGAGTGGAGAATTTGCACCATTTGGGAAGCTGCTTATGGCCTGATTCCTACAAGTTCCTCAGCTGTTGATCTTCCAGAAATTATAGTTGCAACCCCACTTCAACCTCCCGTACTATCATGGAATTTGTACATACCCCTGCTCAAGGTCCTAGAGTACCTTCCTCGCGGAAGCCCATCAAAAGCATGTCTCATGAAAATATTTGCTGCCACTGTGGAAACTATCCTCCAGAGGACATTTCCACCTGAGTCCACTATAGAACAAAACAGAAAATCAAAATACCTCTCTGGCATTAGGTCTGCTTCCAAAAACCTTGCTGTGGCTGAACTTCGTACAATGGTTCATTCGCTGTTCCTGGAATCATGTGCATCTGTAGAGCTTGCTTCACACTTACTTTTTGTTGTCTTAACTGTCTGTGTCAGTCATGAAGCCCAATTTAGTGGAAGCAAGAGGCCAAGAGGTGAAGATAATTCAGCTGAGGAAATCACGGAGGATCTGCAGGCAATTTCTGAAAGGCAGAAAAGAACAAAAAACAGGAAAATGAAGAAGCAAGGTCCTATAGCAGCTTTTGATTCTTATGTTCTTGCTGCTGTTTGTGCTCTTGCCTGTGAACTTCAGTTGTTCCCTTTGCTTTCGCGGGAGAATAATCATTCAGTTTTGAATAATGTTCAAGATATTGCCAAGCCGGTTAGAATAAATGGATCTTCCCATGACTTGCAGAGCGGGCTAGATTCAGCAATACGGCATACTCGCAGAATTCTAGCAATTTTAGAGGCACTATTTTCATTGAAGCCATCTTCTGTTGGCACTCCTTGGAGTTTTAGCTCAAATGAAATAGTTGCAGCAGCTATGGTTGCTGCCCATGTTTCTGAACTATTTAGGCGGTCAAAAGCTTGCATGCATGCTCTGTCTGTTCTGATTCGTTGCAAATGGGACAAGGAAATTCACTCCAGAGCATCGTCTTTGTATAATCTCATAGAGTTTCATAGCAAAGCCGTTGCATCTATAGTTAATAAGGCAGAGCCATTAGAGGCAACCTTGATTCGTGCACCTATTTGGAAGGACTCTCTTGACTGTTTTAACAGTAAAAGACAGAAAAAGAGTAGCTGCTATGACACGGGGGAGACATCTGCATCTTTGGAAGATTCATCCCTCTTAAAATCTAACCATAAATATGAGAAAACTACATGTTCAAATGAGGCATCAGGGTGTACATCTGGTAAAGGTGTCACAGGTTTAACATTGGATGCTTCTGATCTAGCCAACTTCCTCACAATGGACAGGCATATCGGATTGAATTGCAGTGCACAAATTTTTCTGACATCCACGCTGGCAGAGAAACAAGAGCTATGTTTCTCTGTAGTTTCACTACTATGGCACAAGTTGATTGCATCTCCCGAAACTCAGCCTTGTGCAGAAAGCACTTCCGCCCAACAGGGCTGGAGACAGGTTGTTGATGCATTATGCAATGTTGTATCATCCTCACCAACTAAAGCAGCTACTGCAGTTGTTCTTCAAGCGGATAGAGAATTGCAACCCTGGATTGCCAAGGATGATGATTTAGGTCAGAAGATGTGGAGGGTGAATCAGCGGATCGTAAAATTGATAGTGGAATTAATGAGAAATCATGATAGTGCAGAATCATTGGTAATTGTGGCAAGTGCATCAGATTTACTACTACGAGCTACAGATGGGATGCTGGTTGATGGAGAAGCTTGTACTTTACCACAGCTAGAGCTATTGGAAGCAACAGCTAGAGCAGTTGAGCCAGTTCTCGAGTTTGGGGAATCTGGATTGGCAGTGGCAGATGGCCTTTCAAACCTGTTAAAGTGTCGTGTACCAGCTACTGTTAGATGCCTTTCTCATCCAAGTGCACATGTCCGTGCTCTGAGCATATCTGTTCTTCGTGACATTTTGCTTACTGGTTCAATCAGATCGAGTACTAAACCGCACCGAGTAAATGGCAACCACAATCCCTCTCATAAATACTTGAATTTGGATGTCATTGACTGGCATGCTGACATTGAAAAATGCTTGACATGGGAAGCTCACAACCGACTTTCAAACGGATTGTCTATGCAGTTTCTTGATACGGCTGCTATAGAATTAGGTTGTACTCTTTCCGTGTGA 3528 0.4325 MVNKESHGLREGNVVDQIAAYVEYFIQFTSEQFADDIAELIRNRYPSKDILLFDDVLATFVLHHPEHGHEVVLPIISCIIDGTLVYDKISPPFASFISLVYPKSENEYSEQWALAVGEILRILTHYNRPVYKMERQNGETERSSSGSDATTSDSVAGKSVQNSLTQKEKKPTRPLSPWITDILLAAPVGIRSDYFRWCSGVMGKYAAGELKPPTTASSRGSGKHPQLVPSTPRWAVANGAGVILSVCDDEVARNETATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYATGIRLRRVHPLPIFCFICAFKWDHKLQLPRNWMHLHFLRAIGTAMSMRAGIAADAAAALLFRILSQPALLFPPLRQVDGVEVQHEPLGGYISSYKKQIEVPAAEASIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPTSSSAVDLPEIIVATPLQPPVLSWNLYIPLLKVLEYLPRGSPSKACLMKIFAATVETILQRTFPPESTIEQNRKSKYLSGIRSASKNLAVAELRTMVHSLFLESCASVELASHLLFVVLTVCVSHEAQFSGSKRPRGEDNSAEEITEDLQAISERQKRTKNRKMKKQGPIAAFDSYVLAAVCALACELQLFPLLSRENNHSVLNNVQDIAKPVRINGSSHDLQSGLDSAIRHTRRILAILEALFSLKPSSVGTPWSFSSNEIVAAAMVAAHVSELFRRSKACMHALSVLIRCKWDKEIHSRASSLYNLIEFHSKAVASIVNKAEPLEATLIRAPIWKDSLDCFNSKRQKKSSCYDTGETSASLEDSSLLKSNHKYEKTTCSNEASGCTSGKGVTGLTLDASDLANFLTMDRHIGLNCSAQIFLTSTLAEKQELCFSVVSLLWHKLIASPETQPCAESTSAQQGWRQVVDALCNVVSSSPTKAATAVVLQADRELQPWIAKDDDLGQKMWRVNQRIVKLIVELMRNHDSAESLVIVASASDLLLRATDGMLVDGEACTLPQLELLEATARAVEPVLEFGESGLAVADGLSNLLKCRVPATVRCLSHPSAHVRALSISVLRDILLTGSIRSSTKPHRVNGNHNPSHKYLNLDVIDWHADIEKCLTWEAHNRLSNGLSMQFLDTAAIELGCTLSV 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0082 1175 MobiDBLite consensus disorder prediction 142 170 - -
Lal13g0082 1175 MobiDBLite consensus disorder prediction 209 230 - -
Lal13g0082 1175 PRINTS Protein GIGANTEA signature 108 132 IPR026211 GO:2000028
Lal13g0082 1175 PRINTS Protein GIGANTEA signature 169 189 IPR026211 GO:2000028
Lal13g0082 1175 PRINTS Protein GIGANTEA signature 189 207 IPR026211 GO:2000028
Lal13g0082 1175 PRINTS Protein GIGANTEA signature 218 236 IPR026211 GO:2000028
Lal13g0082 1175 PRINTS Protein GIGANTEA signature 236 257 IPR026211 GO:2000028
Lal13g0082 1175 PRINTS Protein GIGANTEA signature 263 281 IPR026211 GO:2000028
Lal13g0082 1175 PRINTS Protein GIGANTEA signature 287 307 IPR026211 GO:2000028
Lal13g0082 1175 PRINTS Protein GIGANTEA signature 312 331 IPR026211 GO:2000028
Lal13g0082 1175 PRINTS Protein GIGANTEA signature 331 351 IPR026211 GO:2000028
Lal13g0082 1175 PRINTS Protein GIGANTEA signature 458 481 IPR026211 GO:2000028
Lal13g0082 1175 PRINTS Protein GIGANTEA signature 518 539 IPR026211 GO:2000028
Lal13g0082 1175 Coils Coil 625 645 - -
Lal13g0082 1175 MobiDBLite consensus disorder prediction 135 173 - -
Lal13g0082 1175 PANTHER PROTEIN GIGANTEA 16 349 IPR026211 GO:2000028
Lal13g0082 1175 PANTHER PROTEIN GIGANTEA 363 1175 IPR026211 GO:2000028
Lal13g0082 1175 PANTHER PROTEIN GIGANTEA-LIKE ISOFORM X1 363 1175 - -
Lal13g0082 1175 PANTHER PROTEIN GIGANTEA-LIKE ISOFORM X1 16 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0082 Lal-Chr13 532336 543229 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0082 K12124 - gmx:100779044 1929.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0082 13 532336 543229 Lal13g0082 13 532336 543229 ECH
Lal12g0099 12 659933 670343 Lal13g0082 13 532336 543229 LSH