LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal12g0099	ATGGCTGTTGCTTCCAGTGAACGATGGATTGACCGTCTTCAGTTCTCATCATTGTTCTGGCCTCCTCCACTAGATGGTCAACAAAGAAAGGATCAAATTGCTGCATATGTGGAGTACTTCATTCAATTTACATCAGAACAATTTGCTGATGATATTGCTGAGTTGATCCGTAACCGTTATCCATCAAAGGACATTCTTCTCTTTGATGATGTTTTGGCAACATTTGTTCTTCATCATCCAGAGCATGGGCATGAAGTTGTACTACCCATTATTTCATGTATTATTGATGGTACACTTGTGTATGATAAGATCATTCCTCCATTTACTTCTTTCATATCTTTAGTCTCCCCAAAAAGTGAGAATGAATACTCAGAACAATGGGCTCTGGCAGTTGGTGAGATTTTGCGTATTTTAACTCATTACAATCGTCCCGTATACAAAATGGAGAGACAAAATGGCGAAACAGAAAGAAGTAATAGTGGCAGCCATGCAACGACTAGTGACTCCGTTGCTGGGAAATCTGTCCATAGTTCTTTGACACAGCAAGAGAAGAAACCTATAAGGCCCCTGTCCCCCTGGATTACCGATATATTGCTCGCTGCACCAGTAGTCATTAGAAGCGACTATTTCCGGTGGTGCAGTGGTGTTATGGGTAAATATGCTGCAGGAGAACTTAAGCCCCCCACAACTGCTTCTTCTCGTGGTTCTGGGAAGCATCCTCAACTTGTGCCTTCAACTCCAAGATGGGCTGTTGCCAATGGGGCTGGTGTTATATTAAGCGTTTGTGATGATGAAGTTGCTCGCAATGAGACTGCGACTTTAACAGCAGCTGCTGTACCTGCACTTTTGCTTCCTCCTCCAACAACTGCTTTGGATGAGCATCTAGTTGCTGGATTACCTGCTCTAGAGCCATATGCACGTTTATTTCATAGATATTATGCCATTGCTACTCCAAGTGCTACACAAAGACTTCTTCTTGGACTTCTAGAAGCACCCCCATCATGGGCTCCAGATGCACTTGATGCTGCTGTGCAGCTTGTGGAACTTCTACGAGCTGCTGAAGATTATGCTAGTGGCATCAGGCTTCCTAGAAATTGGATGCATTTACATTTCTTGCGTGCAATAGGGACTGCAATGTCCATGAGAGCTGGTATAGCTGCTGATGCTGCAGCCGCTTTGCTTTTCCGTATACTTTCACAGCCTGCGTTGCTGTTTCCTCCTCTTAGGCAAGTTGATGGAGTTGAAGTTCAGCATCAACCTTTGGGTGGTTATATTTCTTCCTACAAAAAGCAGATAGAAGTTCCTGCAGCTGAAGCCTCTATTGAGGCTACTGCTCAAGGGATTGCATCAATGCTTTGTGCCCATGGTCCAGAGGTTGAATGGAGAATTTGCACCATTTGGGAAGCTGCTTATGGCCTGATTCCTACAAGTTCCTCAGCTGTTGATCTTCCAGAAATTATAGTTGCAACCCCACTTCAGCCTCCCGTATTATCGTGGAATTTGTACATACCCCTACTCAAGGTCCTCGAGTATCTTCCACGTGGAAGTCCATCAGAAGCATGTCTCATGAAAATATTTGCTGCCACAGTGGAAACTATCCTTCAGAGGACATTCCCACCTGAGCCCACTATAGAAGAAAACAGAAAAGCAAAATACCTCTTTGGCATTGGGTCTGCGTCCAAAAACCTTGCTGTAGCAGAACTTCGTACTATGGTTCATTCACTTTTCCTAGAATCATGTGCATCTGTAGAGCTTGCTTCGCGGCTACTTTTTGTTGTCTTGACTGTCTGTGTCAGTCATGAAGCCCAATTTAGTGGAAGCAAGAGGCCAAGAGGTGAAGATAATTCAGCTGGGGAAATTATTGGGGACTTGCAAGCAATTTCTCAAAGGCAGAAAGAAACAAAAAATAGGAAAATGAAGAAGCAAGGTCCTATAGCTGCATTTGATTCTTATGTTCTGGCTGCTGTTTGTGCTCTTGCCTGTGAACTTCAGCTGTTCCCTTTGCTTTCACGAGGGAATAATCATTCAATTTCAAATAATGTTCGAGATATAGCCAGCCCAGTTACAATAAATGGATCTTCCCACGAGTTGCAGAGTGGGGTAGATTCTGCAATACGCCATACTCACAGAATTCTAGCTATTTTGGAGGCATTATTTTCATTGAAGCCATCATCTGTCGGTACTCCATGGAGTTACAGCTCAAATGAGATAGTTGCAGCAGCTATGGTTGCTGCACATGTTTCCGAACTATTTAGACGGTCAAAAGCTTGTATGCATGCTCTGTCTGTTCTGATTCGTTGCAAATGGAATAAGGAAATTCACTCCAGAGCGTCATCTTTGTATAATCTCATAGAGTTTCATAGCAAAGCTGTTGCATCTATAGTTAATAAGGCAGAGCCATTAGAAGCAACCTTAATTCGTGCACCTATTTGGAAGGACTCCCTTGTTTGTTTTAACAGTAAAAGACAGAAAAATAGTAGCTGCTTTGACCCAGGGGAGACATCTGCATCATTGGGAGATTCACCCCCCTTAAAACCTAACCATAAATCTGAGAAAACTCCATGTTCAAATGTGGCATCAGGGTGTACCTTGGGTAAAGGTGTCACAGGTTTAACATTGGATGCTTCTGATCTAGCCAACTTCCTCACAGTGGACAGGCATATAGGATTGAATTGCAGTGCACAGATTTTCCTGACATCCATGCTGGCAGAGAAGCAAGAGCTATGTTTCTCTGTAGTTTCACTACTGTGGCAAAAGTTGATTGCATCTCCTGAAACTCAGCCTTGTGCAGAAAGCACTTCTGCCCAACAGGGGTGGAGACAGGTTGTTGATGCATTATGCAATGTTGTATCATCCTCGCCAACTAAAGCAGCTACAGCAGTTGTTCTTCAGGCGGATAGAGAATTGCAACCCTGGATTGCCAAGGATGATGATCTAGGTCAGAAGATGTGGAGGGTAAATCAACGGATCGTAAAATTGATAGTGGAATTAATGAGAAATCATGATAGCGCAGAATCATTGGTAATTGTGGCAAGTGCATCAGATTTACTACTACGAGCCACAGATGGGATGCTAGTTGATGGAGAAGCTTGTACTTTACCACAGCTGGAGCTATTGGAAGCAACAGCTAGAGCAGTTCAGCCAGTGCTTGAGTTTGGAGAATCTGGATTGGCAGTGGCAGATGGCCTTTCAAACCTGCTAAAGTGTCGTGTACCAGCTACTGTTAGATGCCTTTCTCATCCAAGTGCACATGTTCGCGCTCTGAGCATATCTGTTCTTCGTGATATTTTGTTTACTGGTTCAATCAGATCGAGTTCTAAACCTCGGCAAATAAATGGCAACCACAATCCCTCTTATCAACACTTGAATTTGGATGTCATTGACTGGCATGCTGACATTGAAAAGTGCTTGATATGGGAAGCTCACAACCGATTATCAAATGGATTGTCCATGCAGTTTCTTGACATGGCTGCTACAGAATTAGGCTGTACTATTTCCATATGA	3504	0.4341	MAVASSERWIDRLQFSSLFWPPPLDGQQRKDQIAAYVEYFIQFTSEQFADDIAELIRNRYPSKDILLFDDVLATFVLHHPEHGHEVVLPIISCIIDGTLVYDKIIPPFTSFISLVSPKSENEYSEQWALAVGEILRILTHYNRPVYKMERQNGETERSNSGSHATTSDSVAGKSVHSSLTQQEKKPIRPLSPWITDILLAAPVVIRSDYFRWCSGVMGKYAAGELKPPTTASSRGSGKHPQLVPSTPRWAVANGAGVILSVCDDEVARNETATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGIRLPRNWMHLHFLRAIGTAMSMRAGIAADAAAALLFRILSQPALLFPPLRQVDGVEVQHQPLGGYISSYKKQIEVPAAEASIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPTSSSAVDLPEIIVATPLQPPVLSWNLYIPLLKVLEYLPRGSPSEACLMKIFAATVETILQRTFPPEPTIEENRKAKYLFGIGSASKNLAVAELRTMVHSLFLESCASVELASRLLFVVLTVCVSHEAQFSGSKRPRGEDNSAGEIIGDLQAISQRQKETKNRKMKKQGPIAAFDSYVLAAVCALACELQLFPLLSRGNNHSISNNVRDIASPVTINGSSHELQSGVDSAIRHTHRILAILEALFSLKPSSVGTPWSYSSNEIVAAAMVAAHVSELFRRSKACMHALSVLIRCKWNKEIHSRASSLYNLIEFHSKAVASIVNKAEPLEATLIRAPIWKDSLVCFNSKRQKNSSCFDPGETSASLGDSPPLKPNHKSEKTPCSNVASGCTLGKGVTGLTLDASDLANFLTVDRHIGLNCSAQIFLTSMLAEKQELCFSVVSLLWQKLIASPETQPCAESTSAQQGWRQVVDALCNVVSSSPTKAATAVVLQADRELQPWIAKDDDLGQKMWRVNQRIVKLIVELMRNHDSAESLVIVASASDLLLRATDGMLVDGEACTLPQLELLEATARAVQPVLEFGESGLAVADGLSNLLKCRVPATVRCLSHPSAHVRALSISVLRDILFTGSIRSSSKPRQINGNHNPSYQHLNLDVIDWHADIEKCLIWEAHNRLSNGLSMQFLDMAATELGCTISI	1167

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal12g0099	1167	MobiDBLite	consensus disorder prediction	150	183	-	-
	Lal12g0099	1167	PRINTS	Protein GIGANTEA signature	5	23	IPR026211	GO:2000028
	Lal12g0099	1167	PRINTS	Protein GIGANTEA signature	123	147	IPR026211	GO:2000028
	Lal12g0099	1167	PRINTS	Protein GIGANTEA signature	184	204	IPR026211	GO:2000028
	Lal12g0099	1167	PRINTS	Protein GIGANTEA signature	204	222	IPR026211	GO:2000028
	Lal12g0099	1167	PRINTS	Protein GIGANTEA signature	233	251	IPR026211	GO:2000028
	Lal12g0099	1167	PRINTS	Protein GIGANTEA signature	251	272	IPR026211	GO:2000028
	Lal12g0099	1167	PRINTS	Protein GIGANTEA signature	278	296	IPR026211	GO:2000028
	Lal12g0099	1167	PRINTS	Protein GIGANTEA signature	302	322	IPR026211	GO:2000028
	Lal12g0099	1167	PRINTS	Protein GIGANTEA signature	327	346	IPR026211	GO:2000028
	Lal12g0099	1167	PRINTS	Protein GIGANTEA signature	346	366	IPR026211	GO:2000028
	Lal12g0099	1167	PRINTS	Protein GIGANTEA signature	378	400	IPR026211	GO:2000028
	Lal12g0099	1167	PRINTS	Protein GIGANTEA signature	450	473	IPR026211	GO:2000028
	Lal12g0099	1167	PRINTS	Protein GIGANTEA signature	510	531	IPR026211	GO:2000028
	Lal12g0099	1167	PANTHER	PROTEIN GIGANTEA-LIKE ISOFORM X1	4	1167	-	-
	Lal12g0099	1167	PANTHER	PROTEIN GIGANTEA	4	1167	IPR026211	GO:2000028
	Lal12g0099	1167	MobiDBLite	consensus disorder prediction	224	245	-	-
	Lal12g0099	1167	MobiDBLite	consensus disorder prediction	824	853	-	-
	Lal12g0099	1167	MobiDBLite	consensus disorder prediction	157	183	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal12g0099	Lal-Chr12	659933	670343	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal12g0099	K12124		-	gmx:100779044	2007.65

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal12g0099	12	659933	670343	Lal13g0082	13	532336	543229	LSH