Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1309 ATGGAAAAGATGTATTTTTTGATATGGGTTTTGATGGGTTTGATTATTATGATGATGGGTTTGAGTGTAGAAGGGGTTGGAGTAAATTGGGGAACACAAGCAACACATGAACTGAAACCAGATATGGTGGTTCAGTTGATGAAAGAGAATGGAATTCAGAAAGTGAAGTTGTTTGATGCAGATTCATCAACTATGAGTGCTCTTTCTGGTTCTGGTATTGAAGTAATGGTTGCTATTCCAAATAATCAGCTTGCTGATATGGTTGATTATGATCGTGCTATGCAATGGGTTAGGAAGAATGTTACTAGTTATAGCTTCAATGGTGGAGTTACTATCAAGTATGTAGCAGTTGGGAATGAACCATTTTTGAAATCCTACAATAATTCATTCTTGAATGTGACCTTACCTGCATTAGAGAACATTCAAAATGCCCTTAATGAGGCTGGTCTATCATCAGTAAAGGCAACAGTACCCTTAAATGCTGATGTATATGAATCTCCAGAGACCAATCCTGTTCCATCTGCAGGAATTTTTAGGCCTGATCTAAGTGATCTTATGACCCAAATAGTCCAATTTTTGAACAAGAATAATGCACCATTCACAGTAAATATTTACCCTTTCCTAAGTCTTTATGGAAATGATAATTTCCCTTTTGACTATGCTTTCTTTGATGGTGCAGTAAATCCCATAAATGATAATGGTATTCTTTACACCAATGTTTTTGATGCAAATTTTGATACTTTAGTCTCTGCATTAAAATCTGTGGGCTTTGGGAACATGCCCATTTTAGTAGGAGAAGTTGGTTGGCCCACAGATGGTGACAAGAATGCAAATTTGGGCAATGCTTTAAGATTTTACAATGGGCTTTTACCCAGGCTTTCTTCAAATAAAGGTACCCCTCTCAGGCCTGGTTATATTGAAGTTTATCTATTTGGGCTTATTGATGAAGATGCTAAGAGTATTGCTCCAGGAAATTTTGAACGCCATTGGGGTATTTTTAAGTATGATGGTAAGCCCAAGTTTCAGTTAGATATTTCTGGTAATAAGGGTCAAAATAATGTACTAATGGGTGCACAAAATGTGTATTATCTTGATCCAAAATGGTGCATGTTTAATCCACAGGCACAAAATCTAAGCACACTTGCAGATAATATAAATTATGCTTGCACTTATGCAGATTGCACTGCACTTGGTTATGGATCTTCTTGCAATAATTTGGATGCTAATGGAAATGCATCATATGCATTTAATATGTATTACCAAGTGCAAAATCAGAATGATTTGGCATGCAATTTTGAAGGTTTAGCAATGATTACTACACAGAATATTTCAACACCTACTTGCAATTTTATCATTCAGATAAACCCTTCATATTCCTCTTATTTGAGGCCTTCACTAGTGGGTTTATTTCTTGTTACACTATCCATTATTATACTTTTGTAG 1443 0.3562 MEKMYFLIWVLMGLIIMMMGLSVEGVGVNWGTQATHELKPDMVVQLMKENGIQKVKLFDADSSTMSALSGSGIEVMVAIPNNQLADMVDYDRAMQWVRKNVTSYSFNGGVTIKYVAVGNEPFLKSYNNSFLNVTLPALENIQNALNEAGLSSVKATVPLNADVYESPETNPVPSAGIFRPDLSDLMTQIVQFLNKNNAPFTVNIYPFLSLYGNDNFPFDYAFFDGAVNPINDNGILYTNVFDANFDTLVSALKSVGFGNMPILVGEVGWPTDGDKNANLGNALRFYNGLLPRLSSNKGTPLRPGYIEVYLFGLIDEDAKSIAPGNFERHWGIFKYDGKPKFQLDISGNKGQNNVLMGAQNVYYLDPKWCMFNPQAQNLSTLADNINYACTYADCTALGYGSSCNNLDANGNASYAFNMYYQVQNQNDLACNFEGLAMITTQNISTPTCNFIIQINPSYSSYLRPSLVGLFLVTLSIIILL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1309 480 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 3 463 - -
Lal12g1309 480 SUPERFAMILY (Trans)glycosidases 26 344 IPR017853 -
Lal12g1309 480 Pfam Glycosyl hydrolases family 17 26 344 IPR000490 GO:0004553|GO:0005975
Lal12g1309 480 Pfam X8 domain 367 437 IPR012946 -
Lal12g1309 480 Gene3D - 364 459 - -
Lal12g1309 480 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 3 463 IPR044965 GO:0004553|GO:0005975
Lal12g1309 480 SMART X8_cls 367 450 IPR012946 -
Lal12g1309 480 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Lal12g1309 480 Gene3D Glycosidases 24 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1309 Lal-Chr12 16055071 16073919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1309 7 454 Miscellaneous Gene Families AT1G64760 72.949 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1309 - - gmx:102666963 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1309 12 16055071 16073919 Lal12g1309 12 16055071 16073919 ECH
Lal8g1039 8 8286787 8291143 Lal12g1309 12 16055071 16073919 PCT
Lal12g1309 12 16055071 16073919 Lal8g1039 8 8286787 8291143 PCT