Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0609 ATGAACAAGGTGCCACTTATCGAAGTTGAACCCAAGGAACTCGAATTTATATTTGAATTAAGGAGGCAAAGTACATGCTCAGTTCAGTTGACTAATACTACCAAGCACTATGTTGCTTTCAAGGTCAAGACGACATCCCCTAAGAAATATTCAGTGCAACCAAATGTTGGAGTTCTCATGCCGAAATCTACTAGTGAATTCATTGTTACAATGCAAGCTCAAAAGGAAGCACCTGCTGATATGGTGTCCAAGGATAAGTTCTTAATCCAGAGTACAATGGTTCCTGCCGAAACAACCCGTGAAGATGTTAATTCCAGCTTGTTTATCAAAGATGGAAGCAGATATATTGAAGAAAATAAGATGAAAGTGGCCCTGATAAGCCCACCTAGTTCATCAGAATTCTCTCCTATTAGTGGAGAATTCAAGAATGGGTCTGACCATGAAAAGGTTGAGATATATAGTGAAGAGAAAATCCAATTCCCAGAACCCATGGTTTCTAAGAAGGTAGAGCATAAGGTGGTTAATGGGATATTAAAGCTTGAAGAGGATATGGAGTTGAAGATGGAACAAGATAAGGGGTTGAAGACTACGAATGGTGTAGATGAGCCAAAAGAAGCAGGGTTGAAAATGTCAAAAGATGAAGAATTGAACACAATAAAGGACGAGGAGGAACTGAAGCCAGAAAAAGCAAAGTTAGAAGTGTATAAAAATCTGGATTTGAACATGGTAAAGAATGTAAAGGAACTAAAGGTATCAAAAAATTCTGAGGAACTGAAGCCAGAAAAAAATGCTGAGTTTGAAGTGTCAAGAGATCTAGAGTTGAAAACAGCGAAGAATGTAGAGGAACTGAAGCCAGAAACAGAAGCAGAGTCAAAAGTTTCCCGGGGAATAGAAGAGCTGAAATTAATTGAAGTTATTGAACAAATGAAGTCTAAACTAGATGGACTTGATTCAAAACTAAATGAGTCTGCTGTAACAATATCGAAGTTGACAGAGGAGAGGAGGCTAAGCAATCAAGAGACAAAAATCTTACAAGAAAAACTAGCTGATCTTATTAATAAAGGTCCAAGAAGTGTTCAAGTCGGGTTCCCACTTCTATATGTCTGTATGGTGGCGCTTGTTTGTGTCTTCTTGGGATACCATTTACAATGTTAA 1155 0.381 MNKVPLIEVEPKELEFIFELRRQSTCSVQLTNTTKHYVAFKVKTTSPKKYSVQPNVGVLMPKSTSEFIVTMQAQKEAPADMVSKDKFLIQSTMVPAETTREDVNSSLFIKDGSRYIEENKMKVALISPPSSSEFSPISGEFKNGSDHEKVEIYSEEKIQFPEPMVSKKVEHKVVNGILKLEEDMELKMEQDKGLKTTNGVDEPKEAGLKMSKDEELNTIKDEEELKPEKAKLEVYKNLDLNMVKNVKELKVSKNSEELKPEKNAEFEVSRDLELKTAKNVEELKPETEAESKVSRGIEELKLIEVIEQMKSKLDGLDSKLNESAVTISKLTEERRLSNQETKILQEKLADLINKGPRSVQVGFPLLYVCMVALVCVFLGYHLQC 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0609 384 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Lal12g0609 384 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 383 IPR016763 GO:0005789
Lal12g0609 384 Coils Coil 327 347 - -
Lal12g0609 384 Gene3D Immunoglobulins 2 125 IPR013783 -
Lal12g0609 384 SUPERFAMILY PapD-like 4 132 IPR008962 -
Lal12g0609 384 Pfam MSP (Major sperm protein) domain 7 101 IPR000535 -
Lal12g0609 384 PANTHER VESICLE-ASSOCIATED PROTEIN 2-2 1 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0609 Lal-Chr12 4391283 4395852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0609 - - aprc:113872404 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0609 12 4391283 4395852 Lal12g0609 12 4391283 4395852 ECH
Lal12g0609 12 4391283 4395852 Lal13g1086 13 8172222 8181061 LSH