Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0121 ATGTTAACAAATATGAGGTTTTTGTTAGTTATTGGTTTTGTCTTCCTGATCCACTTTTTCTGTGTTGATGCTGATGAACCATTATTCTCGTTGGATGGGAAGGTGTTGGTGTTGGACGATTCCAACTTCGAATCCGCTATATCTTCCTTCGATCACATCCTTGTTGATTTTTATGCTCCCTGGTGTGGTCACTGCAAGCGTCTCTCTCCTGAGTTGGATGCAGCCGCGCCTGTACTTGCAAACTTGAAGAGCCCCACAGTCATAGGGAAAGTAGATGCTGACAAGTTTACCCGCCTTGCAAAAAAATATAATGTTGGTGCATATCCAACCATTTTGCTTTTTAATCATGGCGTCCCAACAGAATACCATGGACCAAGGAAAGCAGAGTTACTAGTTCGTTATCTAAAGAAATTTGCTACTTCTGATGTTTCTGTTCTTGATTCAGATTCTGTTGTCAGTAAGTTTGTTGAAGAAGCTGGCACTTTTTTCCCCGTATATATTGGTTTTGGGTTGGACAGTTCTGTAATAGAAAAATTAGCCATAAAGTATAAGAAAAATGCATGGTTTTCTGTGGCAAAGGATTTTTCAGAGGATCTCATGGTATTGTATGACTTTGATAAAGTTCCTGCATTGGTTTCCCTTAATCCAAAATACAATGAGCAAAGCACATTCTATGGCCCCTTTGAAGATGAATTTTTGGAAGATTTTGTTAAACAAAACCTGATTCCCTTAGCAGTGCCTGTATCTCGTGACACACTTAAGTTGATGGAAGCTGATGATAGGAAGATAGTTTTGTCAATTGTTGAGGATGAAAATGAAGAAAAATCAAGGGAACTGGTAAAGCTATTGAAAGCTGCCGCATCTGCAAATCGCGACTTAATATTCGGTTATGTTGGAGTTAAACAGTTGGAAGAATTTGCTGAAAAATTTGATATCAGGACCAAACTACCAAAAATGGTCATATGGGATAAAAGTGATGATTACCTTTCAGTTGTCGGTTCTGAAAGCATTGAGGGGGAGGATAAGTTAACACTGATCTCTAAATTTGTAGAAGGATACAGGGAAGGAAGAACCATACAAAAAACAATTAGTGGCCCTTCACTAATGAAATTTATTAATGGATCTTTTGACATTAGAATGGTGTACTTCCTTGTTTTTATGGTTGCAGTAGTGATGCTTATTCAGAGTATCAATAAAGGAAGTGATGAACACCGAAGAGTACCAAATGAAGATCAGGTTCATCATTCAACCAACTCACTTTCAGAAGTTGAAAGCAAAGAGTACTATAAAGCTGGAGTTAAGCAAGATTAA 1311 0.3791 MLTNMRFLLVIGFVFLIHFFCVDADEPLFSLDGKVLVLDDSNFESAISSFDHILVDFYAPWCGHCKRLSPELDAAAPVLANLKSPTVIGKVDADKFTRLAKKYNVGAYPTILLFNHGVPTEYHGPRKAELLVRYLKKFATSDVSVLDSDSVVSKFVEEAGTFFPVYIGFGLDSSVIEKLAIKYKKNAWFSVAKDFSEDLMVLYDFDKVPALVSLNPKYNEQSTFYGPFEDEFLEDFVKQNLIPLAVPVSRDTLKLMEADDRKIVLSIVEDENEEKSRELVKLLKAAASANRDLIFGYVGVKQLEEFAEKFDIRTKLPKMVIWDKSDDYLSVVGSESIEGEDKLTLISKFVEGYREGRTIQKTISGPSLMKFINGSFDIRMVYFLVFMVAVVMLIQSINKGSDEHRRVPNEDQVHHSTNSLSEVESKEYYKAGVKQD 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0121 436 CDD PDI_a_family 36 135 - -
Lal12g0121 436 PANTHER PROTEIN DISULFIDE ISOMERASE 10 436 - -
Lal12g0121 436 SUPERFAMILY Thioredoxin-like 27 138 IPR036249 -
Lal12g0121 436 MobiDBLite consensus disorder prediction 404 436 - -
Lal12g0121 436 PRINTS Thioredoxin family signature 53 61 - -
Lal12g0121 436 PRINTS Thioredoxin family signature 61 70 - -
Lal12g0121 436 PRINTS Thioredoxin family signature 104 115 - -
Lal12g0121 436 Coils Coil 265 292 - -
Lal12g0121 436 Pfam Thioredoxin-like domain 179 333 - -
Lal12g0121 436 ProSitePatterns Thioredoxin family active site. 54 72 IPR017937 -
Lal12g0121 436 Gene3D Glutaredoxin 231 367 - -
Lal12g0121 436 Gene3D Glutaredoxin 24 148 - -
Lal12g0121 436 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-2 10 436 - -
Lal12g0121 436 ProSiteProfiles Thioredoxin domain profile. 20 140 IPR013766 -
Lal12g0121 436 Pfam Thioredoxin 35 137 IPR013766 -
Lal12g0121 436 SUPERFAMILY Thioredoxin-like 257 357 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0121 Lal-Chr12 835830 839673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0121 K09580 - gmx:100791778 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0121 12 835830 839673 Lal12g0121 12 835830 839673 ECH
Lal12g0121 12 835830 839673 Lal13g0097 13 615672 620525 LSH