Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1488 ATGATGTCTGTGACAAGTAAAAGCATTGATTTTGTTGGGAAAAAAAATTTGGGTTATGGTGGCTGCTTTTCCAATGCTTCGTTTGATTGTTATACAGTGAAGAAGAATTATGCAAAGGTGAATTCTAAAGGGTTGTGGGGGAGAGGCCATGGAACTTCTAATTCTATTTGCTACAAGAGAAGGAATACTCAGTGTCGTGTTTCTTCTATTATAAATATTGTGGAGTCAACCTTGAATGGTGGAACACAAGCAATTCAAGGTCTTACTCGATTGGACTTGAAGAATTATTCTGAAACCCCTATTTCCTCAACTCAGTTGTTTGATGTGGTTGCTGATGATCTGCAAACGCTCAATAAAAACCTTCAATCGCGAGTATTCACAGACAAGGAATGGAAGAAAGATGTGGTGGATGTAAAAAGAATCGGAGATAGAATCATAGCTCTTAAGTTTGTATCAAAGAAAGATACCTTTAATGTGATTGGTGCTTATGCACCCCATATTGTAGGTGCAGAAAATCCAGTTTTAATGTCTGCAGCTGAGCAGATCTTTAGTGCTGGTGGGAAGAGGATGAGACCAGCTCTCGTGTTCTTAGTGTCAAGAGCTACAGCAGAGCTGCTTGGCTTGAATGAACTTACTGCAAAGCATCGACGTTTAGCAGAGATCATTGAAATGATTCATACAGCAAGTTTGATACATGATGATGTATTAGACGAGAGTGACCTACGAAGAGGGAGGGAAACTGTTCATCAACTATTCGGCACAAGAGTGGCAGTGTTGGCTGGAGATTTTATGTTTGCACAGTCATCATGGTATCTAGCCAACCTTGAAAATATTGAAGTCATTAAACTTATCAGCCAGGTTATTAAAGACTTCGCGAGTGGTGAAATAAAGCAAGCTTCTAGCTTGTTTGATTGTGATGTCAAACTCGACGAGTATCTAATTAAGAGTTACTATAAGACGGCCTCCTTGATGGCTGCCAGTACAAAAGGAGCTGCAATTTTTAGTGGCGCAGATAACAGCATCTCTGAGAGAATGTACGAATACGGAAAGAACCTTGGTCTATCCTTCCAAGTTGTGGATGACATATTAGATTTCACACAATCAGCGGAGCAACTAGGAAAGCCTGCCGCCACAGACCTTTCTAAAGGTAACCTGACTGCGCCAGTAATCTTTGCATTGGAGAAAGAACCAAAATTGAGAGATATCATCGAGTCCGAATTTAGCGAGTCCGGTTCCCTCACCGAGGCCATCGAATTGGTCAAGGGTTGTGGAGGCATTGAAAGGGCACAAGAGTTGGCAAAAGAGAAAGCTGATCTTGCTATTCAAAGTCTCCAATGCCTTCCTCAGAGTGTATTTCGTTTAGCTCTTGAGGATATGGTGGCTTATAATCTCCAAAGGATTGCTTAA 1407 0.4115 MMSVTSKSIDFVGKKNLGYGGCFSNASFDCYTVKKNYAKVNSKGLWGRGHGTSNSICYKRRNTQCRVSSIINIVESTLNGGTQAIQGLTRLDLKNYSETPISSTQLFDVVADDLQTLNKNLQSRVFTDKEWKKDVVDVKRIGDRIIALKFVSKKDTFNVIGAYAPHIVGAENPVLMSAAEQIFSAGGKRMRPALVFLVSRATAELLGLNELTAKHRRLAEIIEMIHTASLIHDDVLDESDLRRGRETVHQLFGTRVAVLAGDFMFAQSSWYLANLENIEVIKLISQVIKDFASGEIKQASSLFDCDVKLDEYLIKSYYKTASLMAASTKGAAIFSGADNSISERMYEYGKNLGLSFQVVDDILDFTQSAEQLGKPAATDLSKGNLTAPVIFALEKEPKLRDIIESEFSESGSLTEAIELVKGCGGIERAQELAKEKADLAIQSLQCLPQSVFRLALEDMVAYNLQRIA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1488 468 Pfam Polyprenyl synthetase 174 419 IPR000092 GO:0008299
Lal11g1488 468 SFLD Isoprenoid Synthase Type I 178 461 - -
Lal11g1488 468 PANTHER SOLANESYL DIPHOSPHATE SYNTHASE 2, CHLOROPLASTIC 165 467 - -
Lal11g1488 468 PANTHER SOLANESYL DIPHOSPHATE SYNTHASE 2, CHLOROPLASTIC 66 128 - -
Lal11g1488 468 ProSitePatterns Polyprenyl synthases signature 2. 352 364 IPR033749 -
Lal11g1488 468 ProSitePatterns Polyprenyl synthases signature 1. 230 244 IPR033749 -
Lal11g1488 468 CDD Trans_IPPS_HT 170 466 IPR000092 GO:0008299
Lal11g1488 468 SUPERFAMILY Terpenoid synthases 158 466 IPR008949 -
Lal11g1488 468 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 66 128 - -
Lal11g1488 468 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 165 467 - -
Lal11g1488 468 Gene3D Farnesyl Diphosphate Synthase 149 467 IPR008949 -
Lal11g1488 468 TIGRFAM prenyl_cyano: solanesyl diphosphate synthase 166 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1488 Lal-Chr11 18091610 18095786 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1488 K05356 - gmx:100805842 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1488 11 18091610 18095786 Lal1g1584 1 18227210 18232461 LSH