Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1466 ATGTCAAGCAAAGGAAAAGATATAGTCGATGGATCATCGAGTTCTTCTTTAATTAGTATTGGTGTTAGTAGTGGTGGTGGTGATGATCAGCAGCAACAACAACAGTTGCCGTTGAGCCGATATGAGTCTCAGAAAAGGAGGGATTGGAACACTTTTGGACAATACTTGAGGAATCAAAGGCCTCCGGTGACACTTTCACACTGCAACTCCAACCATGTACTTGATTTCCTTAGGTACTTGGATCAATTTGGAAAAACCAAAGTGCACTTACAAGGGTGTCTTTTCTTTGGGCAAACTGAGCCACCAGGACCTTGCACTTGCCCTCTAAGACAAGCTTGGGGGAGCCTTGATGCACTCATAGGAAGGTTAAGAGCTGCATATGAAGAAAATGGAGGGTTGCCTGAGACAAATCCATTTGCTAGTGGTGCTATAAGAGTCTATCTACGAGAAATAAGAGACTCTCAAGCCAAGGCAAGAGGAATCCCTTATAAGAAGAAAAAGAAGAAGAGGAATGTAATCAAGACCAACGAGGGTACTTCAAACTTACCTATGTAG 555 0.4288 MSSKGKDIVDGSSSSSLISIGVSSGGGDDQQQQQQLPLSRYESQKRRDWNTFGQYLRNQRPPVTLSHCNSNHVLDFLRYLDQFGKTKVHLQGCLFFGQTEPPGPCTCPLRQAWGSLDALIGRLRAAYEENGGLPETNPFASGAIRVYLREIRDSQAKARGIPYKKKKKKRNVIKTNEGTSNLPM 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1466 184 MobiDBLite consensus disorder prediction 1 40 - -
Lal11g1466 184 Pfam ALOG domain 32 153 IPR006936 -
Lal11g1466 184 MobiDBLite consensus disorder prediction 165 184 - -
Lal11g1466 184 ProSiteProfiles ALOG domain profile. 40 167 IPR006936 -
Lal11g1466 184 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-LIKE 2 184 - -
Lal11g1466 184 MobiDBLite consensus disorder prediction 1 42 - -
Lal11g1466 184 PANTHER PROTEIN G1-LIKE2 2 184 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1466 Lal-Chr11 17952174 17952728 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1466 - - gmx:100806493 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0527 1 3383466 3383993 Lal11g1466 11 17952174 17952728 ECH
Lal8g0734 8 5242246 5246641 Lal11g1466 11 17952174 17952728 ECH
Lal10g0662 10 14432928 14433482 Lal11g1466 11 17952174 17952728 ECH
Lal11g1466 11 17952174 17952728 Lal14g1203 14 14021662 14022225 ECH
Lal11g1466 11 17952174 17952728 Lal11g1466 11 17952174 17952728 ECH