Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0662 ATGTCTGCAAGTGGTAGTGGGAAGGATTTAACAGCAGAAGGATCATCAAGCTTATCTCCAAGTGATTACCATGACCATCAACAACAGCAAAACCAAGGAGGGACACTTAGCCGCTATGAATCACAAAAAAGAAGAGACTGGAACACTTTTGGTCAATACTTGAAGAATCAAAGACCACCAGTTCCACTTCCACAGTGCAATAGTAACCATGTTTTGGACTTCCTTAGGTACCTAGACCAGTTTGGTAAGACCAAGGTTCACTTTCAAAGTTGCATTTTCTATGGGCAGCCAGAACCACCATCACCTTGCACATGCCCTCTAAGACAAGCTTGGGGTAGCCTTGATGCCCTTATAGGTAGGTTAAGGGCTGCTTATGAGGAAAATGGAGGGTTACCAGAGACTAACCCTTTTGCAAGTGGCTCAATCCGTTTGTACCTTAGAGAGGTTAAGGAATTCCAAGCTAAGGCAAGAGGTATTCCTTATAAGAAGAAAAAGAAGAACACAAATCCAAGCAAGGGAAATGATGAATCAAGCTCCTCCATGCACTTCTCCTAA 555 0.4324 MSASGSGKDLTAEGSSSLSPSDYHDHQQQQNQGGTLSRYESQKRRDWNTFGQYLKNQRPPVPLPQCNSNHVLDFLRYLDQFGKTKVHFQSCIFYGQPEPPSPCTCPLRQAWGSLDALIGRLRAAYEENGGLPETNPFASGSIRLYLREVKEFQAKARGIPYKKKKKNTNPSKGNDESSSSMHFS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0662 184 Pfam ALOG domain 28 151 IPR006936 -
Lal10g0662 184 MobiDBLite consensus disorder prediction 1 41 - -
Lal10g0662 184 PANTHER PROTEIN G1-LIKE2 3 184 IPR040222 -
Lal10g0662 184 PANTHER DUF640 FAMILY PROTEIN 3 184 - -
Lal10g0662 184 MobiDBLite consensus disorder prediction 1 38 - -
Lal10g0662 184 MobiDBLite consensus disorder prediction 157 184 - -
Lal10g0662 184 ProSiteProfiles ALOG domain profile. 38 165 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0662 Lal-Chr10 14432928 14433482 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0662 - - qsu:112032519 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0662 10 14432928 14433482 Lal11g1466 11 17952174 17952728 ECH
Lal10g0662 10 14432928 14433482 Lal10g0662 10 14432928 14433482 ECH
Lal10g0662 10 14432928 14433482 Lal14g1203 14 14021662 14022225 ECH
Lal10g0662 10 14432928 14433482 Lal8g0734 8 5242246 5246641 LSH