Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1400 ATGGCGTCGGTTCACACCGCCATTCCTCCTCACAGCTTCTTCTCATCAATTTCCAAACCAAAGTCCATTCCTAACTCTCAATTTTCTCCGGTCTCGGAATTTTCACGGAAAATAGTTTTCTCCAGATACAAACGGAAAATCGCGGTGGCGAAAGAATTCGACGTCGTACCGGTGCAGAGTGATGACGTCACGGACCTTCAAGAAGGTGTGGTGGTGAGTAGAGTGGATATGGAAGGTGGTGGCGATGGCGAATTGGCGACTCAGGTGAGTGGATTCGGAGGGAAGGAGGGTTTGTTATCGTTGGAAGGGTTTTCTTCTTCTCCTTCGAATAAGAGTGAAGAGAGCATGGAAAAGCTGGTAGATAGAATTATCAATGCAACTATTGTTCTTGCTGCTGGAACTTTTGCTATCACCAAGCTTCTCACTATTGATCATGATTACTGGCATGGGTGGACAATTTTTGAGATACTAAAATATGCACCTCAGCATAACTGGTATGCTTATGAGGAAGCTCTTAAGACAAATCCAGTTTTTGCCAAGATGGTGATCAGTGGGGTTGTTTACTCCGTAGGTGACTGGATTGCACAGTGCTTTGAAGGAAAACCTCTTTTTGAGTTTGACCGTGCCCGAATGTTCAGATCAGGGCTGGTTGGTTTTACTCTTCATGGCTCGCTTTCTCACTACTATTATCAGTTTTGCGAGGAGCTATTTCCTTACAAAGAATGGTGGGTAGTTCCTGCCAAAGTTGCCTTTGATCAAACTGCATGGTCAGCAGTTTGGAACAGCATTTATTATACAGTTGTGGGACTCCTGCGTTTTGATTCTCCAATCAACATTTTTAATGAATTAAAGGCAACATTTTTCCCCATGTTGACCGCAGGGTGGAAGCTGTGGCCATTTGCTCATCTCATTACTTATGGTGTAATACCAGTTGAACAAAGACTTCTTTGGGTGGATTGTATCGAGCTTATATGGGTGACTATACTTTCAACTTATTCGAATGAAAAATCAGAAGCAAGAAACTCAGAGAATGAGTTACCTGCAGAGGTGAAATCCACTACACCTGAATATCCTCCTGAGGACTAA 1086 0.4337 MASVHTAIPPHSFFSSISKPKSIPNSQFSPVSEFSRKIVFSRYKRKIAVAKEFDVVPVQSDDVTDLQEGVVVSRVDMEGGGDGELATQVSGFGGKEGLLSLEGFSSSPSNKSEESMEKLVDRIINATIVLAAGTFAITKLLTIDHDYWHGWTIFEILKYAPQHNWYAYEEALKTNPVFAKMVISGVVYSVGDWIAQCFEGKPLFEFDRARMFRSGLVGFTLHGSLSHYYYQFCEELFPYKEWWVVPAKVAFDQTAWSAVWNSIYYTVVGLLRFDSPINIFNELKATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDCIELIWVTILSTYSNEKSEARNSENELPAEVKSTTPEYPPED 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1400 361 MobiDBLite consensus disorder prediction 336 361 - -
Lal11g1400 361 PANTHER PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN 96 353 - -
Lal11g1400 361 Pfam Mpv17 / PMP22 family 271 330 IPR007248 GO:0016021
Lal11g1400 361 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 96 353 IPR007248 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1400 Lal-Chr11 17440966 17444490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1400 168 336 Miscellaneous Gene Families AT2G14860 25.444 3.92e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1400 K13348 - gmx:100805057 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1400 11 17440966 17444490 Lal11g1400 11 17440966 17444490 ECH
Lal11g1400 11 17440966 17444490 Lal8g0879 8 6436036 6437565 LSH