Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1378 ATGGCTCTAATGGGTTCTTCAAGAACCAAGCTAGCCACTATTATTACTGAAGCTTTTTCCAAATGGAGAATTTCTCGTTACTCTTATTCCACTGCTTCTTCTTCTGCTGCTACTACTGAACTAGAAGGTAGCTTCTTTGGACTGAAGGATTATGCTGATTATAGAAGATCCGTTTATGGTGAAATTACATATAAGGCCCTTCTTGTTGATGTTGTTGGCACCCTAATCATCCCTTCTCAACCTATGGCTCAGATATATAGGAAGATTGGGGAGAAATATGGTGTGGAGTATTCAGAGGATGAGATATTGCAGAGATATAGAAGAGCTTATAGTCAACCTTGGGGTAAATCTCGTCTCAGATATGTTAATGATGGCCGGCCCTTCTGGCAATATATAGTTAGTTATTCCACTGGCTGTTCAGATTCTCAGTACTTTGAAGAGGTTTATAACTACTATATAACAGACAAGGCATGGCATCTCTGCGATCCAGAATCTGAAGAAGTGTTTAGAGCTCTTAGAGAATCAGGTGTCAAATTGGCCATAGTGTCAAATTTTGACACTAGATTAAGACCTCTCCTGCGGGCATTAAATTGTGATAATTGGTTTGATGCAGTAGCAGTATCAGCTGAGGTTGCAGCAGAGAAGCCAAATCCAACAATATTTCTTAAAGCATGTGACATGTTGGGTGTGAAACCTGAGGATGCTGTTCATGTGGGGGATGATCGTAGAAATGATATCTGGGGTGCCAGAGATGCTGGCTGTGATGCTTGGCTTTGGGGAAGTGATGTTCACTCCTTTAAAGTGGTAGCTCAGAGGATTGGGGTTCAGATCTGA 834 0.4149 MALMGSSRTKLATIITEAFSKWRISRYSYSTASSSAATTELEGSFFGLKDYADYRRSVYGEITYKALLVDVVGTLIIPSQPMAQIYRKIGEKYGVEYSEDEILQRYRRAYSQPWGKSRLRYVNDGRPFWQYIVSYSTGCSDSQYFEEVYNYYITDKAWHLCDPESEEVFRALRESGVKLAIVSNFDTRLRPLLRALNCDNWFDAVAVSAEVAAEKPNPTIFLKACDMLGVKPEDAVHVGDDRRNDIWGARDAGCDAWLWGSDVHSFKVVAQRIGVQI 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1378 277 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 32 277 - -
Lal11g1378 277 Pfam Haloacid dehalogenase-like hydrolase 70 256 IPR041492 -
Lal11g1378 277 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 64 75 IPR006439 -
Lal11g1378 277 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 172 185 IPR006439 -
Lal11g1378 277 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 202 218 IPR006439 -
Lal11g1378 277 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 220 240 IPR006439 -
Lal11g1378 277 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 174 253 IPR006439 -
Lal11g1378 277 PANTHER - 32 277 - -
Lal11g1378 277 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 155 255 IPR006439 -
Lal11g1378 277 SFLD Haloacid Dehalogenase 64 258 - -
Lal11g1378 277 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 64 258 - -
Lal11g1378 277 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 65 258 IPR011949 -
Lal11g1378 277 SUPERFAMILY HAD-like 64 265 IPR036412 -
Lal11g1378 277 Gene3D - 80 153 IPR044924 -
Lal11g1378 277 CDD HAD_dREG-2_like 165 276 - -
Lal11g1378 277 Gene3D - 69 260 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1378 Lal-Chr11 17304054 17308302 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1378 - - adu:107492671 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1378 11 17304054 17308302 Lal11g1378 11 17304054 17308302 ECH
Lal11g1378 11 17304054 17308302 Lal20g0288 20 2158382 2162274 LSH