Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1309 ATGATGCTCAGAATCCGAAGCCGCGACGGTCTCGAACGTATCACAATCGACAACCCAAACATCACTATTTCTCAACTCAAAACCATTATCCAAACCCAACTTTCCATTCCAATCCATAACCAAACCCTTTCCACCAACCAAAACCTCCTCTTATCCAAAACCAACAACGACCTTAACCGTTTCACCGATATGTCAAACCCCAATACCCCAATTTCCTCTCTCAACCTCACCCACGGCTCAATTATCTTCCTTTCCTACGACGGCGAAAGGAAGATCATTGGGCCCACCACTGCTTTCACTCCTGCTGGCTCTTTCGGCCGTAAGATGACTATGGATGACCTTATTGCTAAACAAATGCGGGTCTCCCGACAGGAGTCCCCGCATTGTCAATCTGTCTCTTTTGACCGCGACTGCGCGAATGCGTTTCAGCTTTATGTCAATGAAACGCTCGCGTTCGCGGTCAAAAGAGGCGGGTTTATGTATGGGACGGTTAATGATGATGGGGAGGTTGAGGTGGATTTTATATATGAGCCACCTCAACAGGGTTTGGAGGAGAATTTAGTAATTTTTAGGGACCCCGAGGAGGAGGAGAAGGCGGTGGAGGCGATCGCATTAGGGTTAGGGATGAGGAAGGTAGGGTTTATATTTACTCAGACTGTTAGTCAGGATAAGAAGGATTATACTTTGTCGAATCGGGAGGTTATTCAGGCGGCCGAGTTTCATGCTGAGAGTGGGTTGAAGGAGTGGGTTACTGCTGTGGTGAAATTGGAGGTGAATGAGGAGATGGATGGTGCTGCTGATGTACATTTTGAGGCTTTTCAGATGAGTGATGTGTGTGTGAAGTTGTTTAAGGAAGGGTGGTTTGAGACTGAGATTAAGGATGATGATGATCCTAAGTTGTCTAAGATGAAGAAGGATGTTGTTGTTGGTGTTAAGGATACTAAAGAGGTCGATAATGATTTCTTCTTGGTTGTTGTCAAAATCCTTGATCATCAGGGTCCTCTGTCATCTACATTTCCCATTGAGAACCGAAATACTCAAGTGACTATGAAGGCACTGAAGAATCATCTTGATCGGACAAAAAGTCTTCCATTTGTGAAGCGAATTTCTGATTTTCATCTTCTTCTTGTATTAGCAAGGGTTTTCGACGTTGCTGCTGATGTTCCTGCATTGACCGAATGTGTGCAGACACAATCTGCTATACCTGAAGGTTATCAAATTCTTATCGAGTCCATGGCCGGTGCTGCTTGA 1251 0.4508 MMLRIRSRDGLERITIDNPNITISQLKTIIQTQLSIPIHNQTLSTNQNLLLSKTNNDLNRFTDMSNPNTPISSLNLTHGSIIFLSYDGERKIIGPTTAFTPAGSFGRKMTMDDLIAKQMRVSRQESPHCQSVSFDRDCANAFQLYVNETLAFAVKRGGFMYGTVNDDGEVEVDFIYEPPQQGLEENLVIFRDPEEEEKAVEAIALGLGMRKVGFIFTQTVSQDKKDYTLSNREVIQAAEFHAESGLKEWVTAVVKLEVNEEMDGAADVHFEAFQMSDVCVKLFKEGWFETEIKDDDDPKLSKMKKDVVVGVKDTKEVDNDFFLVVVKILDHQGPLSSTFPIENRNTQVTMKALKNHLDRTKSLPFVKRISDFHLLLVLARVFDVAADVPALTECVQTQSAIPEGYQILIESMAGAA 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1309 416 Pfam Nuclear pore localisation protein NPL4 1 84 IPR024682 -
Lal11g1309 416 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 2 90 IPR016563 GO:0006511
Lal11g1309 416 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 102 414 IPR016563 GO:0006511
Lal11g1309 416 ProSiteProfiles MPN domain profile. 131 279 IPR037518 -
Lal11g1309 416 SUPERFAMILY Ubiquitin-like 1 89 IPR029071 -
Lal11g1309 416 CDD Ubl_AtNPL4_like 1 85 - -
Lal11g1309 416 Pfam NPL4 family 169 285 IPR007717 -
Lal11g1309 416 Gene3D - 1 99 - -
Lal11g1309 416 CDD MPN_NPL4 120 378 IPR007717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1309 Lal-Chr11 16729105 16732099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1309 K14015 - gmx:100811623 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1309 11 16729105 16732099 Lal20g0234 20 1645520 1660068 LSH