Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1264 ATGGCGTATTTTCACATTATTCTCTATCTCCTCATCTCATTCACCACATTAACTTCATCAAACCCATACACAATTACTCTTCCTCTTTCTCCCTTATTCACCAACCACCTTTCATCACCACCAGATCCATTCCAATCCCTCAAACTCGCCGCTTCTGCTTCTCTAACACGCGCCCACCACCTCAAACACCGCAACAACAACCACCCTTCAACTGTCACCACCCAAATCCACCCTAAAAGCTACGGTGGTTACTCTATCGATCTTAAATTTGGAACACCAGCTCAAACCTCGTCCTTTGTCTTAGACACCGGAAGCAGCCTTGTCTGGTTCCCATGTTCCTCTCGTTACACTTGTTCTTCTTGTTCCTTTCCCAATATTGACCCAACCAAAATATCTAAATTCATTCCAAAAAACTCAACCTCTTCAAAAATCGTGGGTTGTACTAACCCAAAATGTAGTTGGATTTTTGGTTCCGATATTCAATCTCGTTGCAATGGTTGCAACCCCAATACTCAAAATTGTACCTTTAATTGTCCTACATATATAATTCAATATGGGTTGGGTACCACAGCGGGTTTATTACTCTCTGAAAATCTCAACTTTCCGGGGAAAATTATCAATGATTTTCTTGTTGGTTGTTCTCTTCTTTCAATTCGGCAACCTTCGGGGATTGCTGGATTTGGACAAGGTTTAGAATCACTTCCATCGCAAATGGGGTTGAAGAGATTCTCTTACTGCTTAGTTTCTCACAAGTTCGATGATTCGCCTGAGAATAGTGAACTCGTTTTGCAAATTGGTTCCTCTGGCGACCGGAAAACCAGTGGGTTAAGCTACACGCCGTTTCAAAAAAATCCTGAAGTGAATTCTGCTTTTCGCGAGTACTATTACGTGAACCTTAAGAAAATCATGGTTGGTGGAAAACGGGTCAAGATTGCGAATAAGTTTTTGGAACCAGATTTCAATGGGAACGGTGGAACCATCGTTGATTCTGGCTCAACGTTTACGTTTATGGAGAGACCAGTGTTTGAATTGGTGGCTCAAGAGTTTGAGAAGCAAATGAAGAATAACACGAGGGCTAAAGAAGTTGAAACTGGATCCGGTTTGAGTCCTTGTTTTACGGTTGATGTCTCCGGCGGCAATATTGAATTGCCGGAATTAACTTTCGGGTTCAAGGGTGGTGCCAAAATGACATTGCCTGGGGCGAATTATTTCTCATTTGTGAACAATGACAGCGTGGTTTGTTTGACGATTGTTTCCGATGACGCTGGCGGTCCGGCCAAGGCTGGTGGTCCGGCTATCATATTGGGGAACTATCAGCAGCAGAATTTCTATGTGGAATATGATTTGGAAAATCTGAGGTTGGGATTTGGTACTAGGAGTTGTAATAAGAGTACTTAA 1398 0.4256 MAYFHIILYLLISFTTLTSSNPYTITLPLSPLFTNHLSSPPDPFQSLKLAASASLTRAHHLKHRNNNHPSTVTTQIHPKSYGGYSIDLKFGTPAQTSSFVLDTGSSLVWFPCSSRYTCSSCSFPNIDPTKISKFIPKNSTSSKIVGCTNPKCSWIFGSDIQSRCNGCNPNTQNCTFNCPTYIIQYGLGTTAGLLLSENLNFPGKIINDFLVGCSLLSIRQPSGIAGFGQGLESLPSQMGLKRFSYCLVSHKFDDSPENSELVLQIGSSGDRKTSGLSYTPFQKNPEVNSAFREYYYVNLKKIMVGGKRVKIANKFLEPDFNGNGGTIVDSGSTFTFMERPVFELVAQEFEKQMKNNTRAKEVETGSGLSPCFTVDVSGGNIELPELTFGFKGGAKMTLPGANYFSFVNNDSVVCLTIVSDDAGGPAKAGGPAIILGNYQQQNFYVEYDLENLRLGFGTRSCNKST 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1264 465 SUPERFAMILY Acid proteases 80 462 IPR021109 -
Lal11g1264 465 PANTHER OS07G0603500 PROTEIN-RELATED 6 461 - -
Lal11g1264 465 PANTHER BNACNNG47670D PROTEIN 6 461 - -
Lal11g1264 465 PRINTS Pepsin (A1) aspartic protease family signature 90 110 IPR001461 GO:0004190|GO:0006508
Lal11g1264 465 PRINTS Pepsin (A1) aspartic protease family signature 326 337 IPR001461 GO:0004190|GO:0006508
Lal11g1264 465 PRINTS Pepsin (A1) aspartic protease family signature 433 448 IPR001461 GO:0004190|GO:0006508
Lal11g1264 465 ProSiteProfiles Peptidase family A1 domain profile. 84 457 IPR033121 -
Lal11g1264 465 Gene3D Acid Proteases 264 465 IPR021109 -
Lal11g1264 465 Gene3D Acid Proteases 59 256 IPR021109 -
Lal11g1264 465 Pfam Xylanase inhibitor C-terminal 295 457 IPR032799 -
Lal11g1264 465 Pfam Xylanase inhibitor N-terminal 84 262 IPR032861 -
Lal11g1264 465 CDD pepsin_A_like_plant 83 461 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1264 Lal-Chr11 16310481 16311878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1264 55 463 Miscellaneous Gene Families AT1G44130 23.690 8.00e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1264 - - gmx:100805927 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1264 11 16310481 16311878 Lal11g1264 11 16310481 16311878 ECH
Lal11g1264 11 16310481 16311878 Lal20g0188 20 1307204 1308697 LSH