Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1247 ATGATGCTGAAATATGATATAAATGGACACATCAATCACATGCAGATCCAAATGGTGAGTCCCATGTACTACAATGGATACTACCATCTCTTTTACCAATATAACCCAAATGGGTCAGTGTGGGGTAACATTGTGTGGGCTCACTCAGTATCAAAGGATCTTGTCAACTGGAAAGCACTTGAACATGCCATTTACCCGTCCAAACCCTTTGACAAGTTCGGGTGTTGGTCCGGGTCAACCACCGTGGTCCCGGGTAAAGGACCTGTGATCCTCTACACCGGAATCACTGATGATAAAAATACTCAGGTACAATGCTACGCTGTGCCTGAAGATCCATCCGACCCACTCCTCGTAAAATGGGTAAAACCCGATGACATCAACCCGATTGTGATTGCTGACAAAGGAGTGAATGGTAGCGCTTTCCGTGATCCAACAACAGCATGGTGGAGCAAGGACGGACATTGGAGGATGTTGGTTGGTAGTAGAAAGAAGCATAAAGGGATTGCTTATTTGTACAAGAGCAAGGACTTTATAAAATGGGTTAAGGCAAAACACCCTATCCATTCAAAATCATCCACTGGTATGTGGGAATGCCCTGATTTTTTCCCAGTTGCCTTGGAAGGCAAGGAAGCATTGGACACAGGTGTGATAGGGAATAATGTGAAGCATGTCCTAAAGAATAGCCTTGATATGACTAGATTTGAGTACTATACATTAGGAACATATTTTCCTAATATGGATAAATATGTGCCTGATAACACTTCAGAGGATGGTTGGGGTGGCCTAAGATATGATTATGGTAACTTTTATGCTTCAAAGTCATTCTTTGATCCTAGCAAGAATAGAAGGATTTTGTGGGGTTGGGCAAATGAGTCTGATTCAAAGGAAGATGATGTTAACAAAGGTTGGGCAGGAATTCAGGCAATTCCAAGGACCATTTGGCTTGATCCATCTAAGAGACAATTGTTACAATGGCCTATTGAAGAATTAAACAGTCTTAGAGGGAAAGAAGTTAAGATGAACAATCAAAAGCTTAATAAAGGAGATTATGTTGAAGTAAAAGGAGTTACTGCACCCCAGGCTGATGTGGAAGCTACCTTCTCATTTTCAAGCTTGGACAAGGCAGAGGCATTTGATCCAAGTTGGGTGAATGCACAGGATCTATGTGCCCAAAAGGGTTCAAAGCTTCAAGGTGGAGTTGGACCCTTTGGGCTTCTCACTCTGGCTTCACAAGATCTAGAGGAGTTCACTCCTGTGTTCTTCAGAATTTTCAAAGCTGCAAATAAGCATGTGGTTCTCATGTGCTCTGATGCAACTAGTTCCTCAATTAAGAGCAATTTATACAAACCATCATTTGCTGGTTTTCTAGATGTGGATTTAACCACTAGCAAAATTCCTCTTAGGAGTTTGATCGATCACTCTGTAGTGGAGAGTTTTGGAGCAGGAGGGAAAACAAACATCTTGTCTAGGGTATATCCAGCTCTAGCTGTAGGAGATCAAGCTCATTTGTTTGTGTTCAACAATGGCACTGAGCCAATCACAGTAGAGAACCTTCAAGCATGGAGCATGGGAAAAGCTGATATAAAATGA 1590 0.4208 MMLKYDINGHINHMQIQMVSPMYYNGYYHLFYQYNPNGSVWGNIVWAHSVSKDLVNWKALEHAIYPSKPFDKFGCWSGSTTVVPGKGPVILYTGITDDKNTQVQCYAVPEDPSDPLLVKWVKPDDINPIVIADKGVNGSAFRDPTTAWWSKDGHWRMLVGSRKKHKGIAYLYKSKDFIKWVKAKHPIHSKSSTGMWECPDFFPVALEGKEALDTGVIGNNVKHVLKNSLDMTRFEYYTLGTYFPNMDKYVPDNTSEDGWGGLRYDYGNFYASKSFFDPSKNRRILWGWANESDSKEDDVNKGWAGIQAIPRTIWLDPSKRQLLQWPIEELNSLRGKEVKMNNQKLNKGDYVEVKGVTAPQADVEATFSFSSLDKAEAFDPSWVNAQDLCAQKGSKLQGGVGPFGLLTLASQDLEEFTPVFFRIFKAANKHVVLMCSDATSSSIKSNLYKPSFAGFLDVDLTTSKIPLRSLIDHSVVESFGAGGKTNILSRVYPALAVGDQAHLFVFNNGTEPITVENLQAWSMGKADIK 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1247 529 SUPERFAMILY Concanavalin A-like lectins/glucanases 326 525 IPR013320 -
Lal11g1247 529 CDD GH32_Fruct1-like 21 315 - -
Lal11g1247 529 Gene3D - 340 523 - -
Lal11g1247 529 Gene3D Glycosyl hydrolase domain; family 43 11 339 IPR023296 -
Lal11g1247 529 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 10 529 - -
Lal11g1247 529 Pfam Glycosyl hydrolases family 32 C terminal 329 522 IPR013189 -
Lal11g1247 529 SUPERFAMILY Arabinanase/levansucrase/invertase 21 327 IPR023296 -
Lal11g1247 529 Pfam Glycosyl hydrolases family 32 N-terminal domain 21 326 IPR013148 -
Lal11g1247 529 SMART glyco_32 10 483 IPR001362 GO:0004553|GO:0005975
Lal11g1247 529 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 10 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1247 Lal-Chr11 16182661 16185141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1247 21 525 Glycoside Hydrolase AT2G36190 64.990 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1247 K01193 - gmx:100777418 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1247 11 16182661 16185141 Lal11g1247 11 16182661 16185141 ECH
Lal11g1247 11 16182661 16185141 Lal1g1750 1 19877320 19883123 LSH