Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1233 ATGACGAAAACACCCTTGTCTGTTGAAATTATCCTTCTAAGTTCTAACGTCACAACCAACCATGTCTCATCTCCATTGTTGAAGAATCAGTTGCAGAATAGTAAAGGAATCATCAAATCAATGGCTTCGAAGGCGATGGCTATGGCATCGGAGAAGTTTGGAACGGCGGCACGTCGTCAAGCAGTGACGTTAACCGACGCCGCCGCGTCGCGAATACGACAGTTGCTACAGCAGCGTCAGAGGTCGTTCTTGAAACTCGGAGTCAAGGCTCGCGGTTGTAACGGTTTATCATATACTCTCAATTACGCAGATGAAAAAGGTAAGTTTGATGAGTTGATTGAGGATAAGGGTGTTAAGATATTGATTGATCCAAAAGCTCTTATGCATGTTATTGGAACTAAGATGGATTTTATAGATGACAAACTGAGATCTGAGTTTGTTTTCGTCAATCCAAACTCTAAAGGCCAATGTGGTTGTGGCGAATCTTTCATGACCACAACCAGTAGTGGTGCTGCTAAATCATGA 525 0.4305 MTKTPLSVEIILLSSNVTTNHVSSPLLKNQLQNSKGIIKSMASKAMAMASEKFGTAARRQAVTLTDAAASRIRQLLQQRQRSFLKLGVKARGCNGLSYTLNYADEKGKFDELIEDKGVKILIDPKALMHVIGTKMDFIDDKLRSEFVFVNPNSKGQCGCGESFMTTTSSGAAKS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1233 174 Gene3D - 61 167 IPR035903 -
Lal11g1233 174 ProSitePatterns Hypothetical hesB/yadR/yfhF family signature. 146 163 IPR017870 -
Lal11g1233 174 PANTHER IRON-SULFUR ASSEMBLY PROTEIN ISCA-LIKE 3, MITOCHONDRIAL 33 173 - -
Lal11g1233 174 PANTHER IRON-SULFUR CLUSTER ASSEMBLY PROTEIN 33 173 - -
Lal11g1233 174 SUPERFAMILY HesB-like domain 61 154 IPR035903 -
Lal11g1233 174 Pfam Iron-sulphur cluster biosynthesis 62 161 IPR000361 -
Lal11g1233 174 TIGRFAM TIGR00049: iron-sulfur cluster assembly accessory protein 62 164 IPR016092 GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1233 Lal-Chr11 16110202 16113133 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1233 K22063 - gmx:100792861 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1233 11 16110202 16113133 Lal11g1233 11 16110202 16113133 ECH
Lal11g1233 11 16110202 16113133 Lal20g0170 20 1171912 1174868 LSH