Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1220 ATGCCAAAGTTCAAAACCATGGTTGTTCGAAGCCTCATTCCCTTGGTCTTTCTCTTTCTAATTTCTGGGTTCTTTGAATTTGATGTTGTTTATTCCTATACTCGCCCACCTCCTCGTAAAACCATCTTCACCCCACATTTCGATGATGACTCATCCCCACAACAGGTACATATATCTCAAGTTCGTGGAGACCACATGATGATAACGTGGATCACAGAAAGCTCAACCCCTCCAACAATTCAATATGGTACAACTCCTTCAGCTAACAGCTTCAATGACACTGGAATTACTGATTCATATCGTTACCTTCTATATGAGTCTGGAGAAATTCACTATGTAATAATTGGTCCTCTTAAGCCTAATACAATCTACTACTATCGTTTGGGTCATTCTCCCAAAGAATACTCTTTCAAGACTACACCTTCTCAATTCCCTATCAAGTTTGCAGTTGCAGGAGATCTTGGACAAACAGAATGGACTACATCCACTTTGGAGCATATAAACAAGTCAAATTACGATATGTTGCTATTACCTGGGGACTTGGCTTATGCAGACTTAAATCAAAATCTATGGGACTCATTTGGTCGCTTGGTTGATCCATTAGCAAGCCGAAGACCATGGATGGTGACACAAGGCAACCATGAAGTTGAGAAAATTCCAGTGCTTCACAATGAGCCATTTATAGCTTACAATAAAAGGTGGAAAATGCCATTTGAAGATAGTGGATCGGATAGTAACCTCTATTACTCTTTTGATGTGGCGGGTGTTCATGTTATCATGTTAGGATCATACACTGATTTTGACAGTAAATCTAATCAATATAAATGGCTTCAAAAGGACTTGGAGAATGTGATTAGGGAAAAGACACCTTGGGTTGTGGTGCTGATTCATGCCCCTTGGTATAATTCAAACAATGCTCATCAGGGTGAATCTGAATCAGTTGATATGAAGGCTAGCATGGAAGATTTACTCTATCTAGCTCGGGCTGATGTTGTTTTTGAAGGGCATGTTCATGCCTATGAGAGATTTAGTCGTGTTTATAAAGACAAAGGTGACAAGTGTGGTCCTATGTATATCAACATTGGGGATGGGGGTAACCGCGAAGGCCTTGCCACCAAGTACATTGACCCCAAACCAGAGATATCATTATTTAGGGAAGCTAACTTTGGACATGGGACACTAGAAGTATTTAATGCAACACATGCACTTTGGAATTGGCATAAGAATGATAACGATGAAGTAGTTTTTAGTGACTCTGTGTGGCTGACAAATCTCTCTTTAGATCTTGGTTGTAAAGTTTGA 1302 0.3994 MPKFKTMVVRSLIPLVFLFLISGFFEFDVVYSYTRPPPRKTIFTPHFDDDSSPQQVHISQVRGDHMMITWITESSTPPTIQYGTTPSANSFNDTGITDSYRYLLYESGEIHYVIIGPLKPNTIYYYRLGHSPKEYSFKTTPSQFPIKFAVAGDLGQTEWTTSTLEHINKSNYDMLLLPGDLAYADLNQNLWDSFGRLVDPLASRRPWMVTQGNHEVEKIPVLHNEPFIAYNKRWKMPFEDSGSDSNLYYSFDVAGVHVIMLGSYTDFDSKSNQYKWLQKDLENVIREKTPWVVVLIHAPWYNSNNAHQGESESVDMKASMEDLLYLARADVVFEGHVHAYERFSRVYKDKGDKCGPMYINIGDGGNREGLATKYIDPKPEISLFREANFGHGTLEVFNATHALWNWHKNDNDEVVFSDSVWLTNLSLDLGCKV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1220 433 CDD MPP_PAPs 142 424 IPR041792 -
Lal11g1220 433 Pfam Calcineurin-like phosphoesterase 147 340 IPR004843 GO:0016787
Lal11g1220 433 Gene3D - 143 428 IPR029052 -
Lal11g1220 433 Pfam Purple acid Phosphatase, N-terminal domain 53 139 IPR015914 GO:0003993|GO:0046872
Lal11g1220 433 Pfam Iron/zinc purple acid phosphatase-like protein C 355 415 IPR025733 -
Lal11g1220 433 SUPERFAMILY Metallo-dependent phosphatases 145 416 IPR029052 -
Lal11g1220 433 PANTHER PURPLE ACID PHOSPHATASE 22 16 427 - -
Lal11g1220 433 Gene3D - 52 142 - -
Lal11g1220 433 PANTHER ACID PHOSPHATASE RELATED 16 427 IPR039331 GO:0003993
Lal11g1220 433 SUPERFAMILY Purple acid phosphatase, N-terminal domain 38 141 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1220 Lal-Chr11 15928796 15933137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1220 53 414 Miscellaneous Gene Families AT2G03450 25.000 8.71e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1220 K22390 - gmx:100794764 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1220 11 15928796 15933137 Lal11g1220 11 15928796 15933137 ECH
Lal11g1220 11 15928796 15933137 Lal20g0166 20 1140784 1150250 LSH