Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1210 ATGGCTTACACTATCTCAGGAATTCGATTCCCCGTTGTTCCTTCTTCGGTTCATAAACCGTCGCAACCGAGCTTCTTCCATGGCGATCGCACCAGAGGTGCTTCTCTCTCATTCTTTCTCAACAAGAATGACTCCTTCTCTCGGAAAATCCTTGCTGTAAAAGTTTCCCCTGATTCTGACTCTACATCTTCCACAATTGCTGAATCTGATAAAGTACTTATTCCTCAAGACGAGGATAACTCTTCATCCTTGACAGATCAACATGAAACTCCTGATATAATCTCAGAGGGTCCAGAGTCTGTTCAGAATGAAGAGGATTTAACATTGGAAGATGAGAACAAATATAATGACGATGAAGCAGCTAGCAGTTACAGAGAGGATGAGGATGTGCAAGATTCTTTTGTGTCATCATTTCTAGATGTTAACGCCCATGCTCAAGCTGAGACAACATCAGTATCAATAGACAGAAAAGTAAAAATAAAAAGTGATGAGGTGAAATCGAAAATCATTCCCCCACCTGGCACTGGGAAGAAAATATATGAAATTGATCCATTTTTGCATGCTCACAGTGAACATCTTGATTTCCGTTACGGACAATACAAAAGACTGCGTGAGAAAATTGACAAGTATGAAGGCGGTCTGGATGCATTTTCTCGTGGTTATGAAAAATTTGGCTTCACACGCAGTGAGACAGGCATTACTTATAGAGAGTGGGCACCCGGAGCTAAGACAGCAGCGTTAGTCGGAGACTTCAACGGTTGGAATCCAAATGTAGATGAAATGGTTCGGAATGAGTTTGGTGTATGGGAGATCTTCTTGCCAAACAATGTGGATGGTTCACCAGCAATTCCCCATGGTTCTCGAGTCAAGATCCGTATGACCACTCCCTCTGGAGTCAAGGACTCAATTCCTGCTTGGATCAAGTTCTCTGTACAGGCATCTGGTGAAATTCCATATAACGGAATATACTATGATCCACCAGAAGAGGAAAAATATGTAATCAAACATCCACAGCCAAAGAGACCAAAATCACTTAGAATATATGAATCACATGTTGGAATGAGTAGTCCAGAGCCAAAAATAAACACATATGCCAATTTTAGAGATGACGTACTACCTCGTATTAAAAAGCTTGGCTATAATGCTGTCCAGATTATGGCCATCCAAGAACATTCTTATTATGCTAGCTTTGGGTACCATGTTACAAATTTCTTTGCCCCCAGCAGCCGATTTGGAACTCCAGACGAACTTAAGTCTCTAATTGACAGAGCTCATGAACTAGGTCTGCTTGTTCTGATGGATATTGTACATAGCCATGCATCAAGTAATACATTGGATGGGCTGAACTTGTTTGATGGAACTGATAGTCATTACTTCCATCCCGGGTCACGCGGTTATCATTGGATGTGGGATTCTCGCCTTTTTAACTATGGAAGCTGGGAAGTACTAAGGTATCTACTTTCAAATGCAAGATGGTGGCTAGATGAATACAAGTTTGATGGGTATAGATTTGATGGAGTCACATCAATGATGTACACTCATCATGGATTGGAGGTAACTTTCACTGGAAATTACAGTGAGTATTTTGGTTTTGCAACTGATGTTGATGCTGTGGTTTACCTTATGCTGGTTAATGATCTTATCCATGGGCTCTTCCCTGAAGCTGTTACTATCGGTGAAGATGTCAGTGGAATGCCGGCATTCTGCATTCCTACACAAGATGGTGGAATTGGCTTTGATTATCGCCTGCACATGGCTATTGCCGACAAGTGGATTGAGCTTCTCAAGAAGCAAGACGAAGACTGGAGAATGGGAGATATAATTCACACGCTCACAAACAGGAGGTGGCGGGAAAAATGTGTTGCTTATGCTGAAAGTCATGATCAAGCGTTGGTTGGTGACAAGACACTTGCATTTTGGTTGATGGACAAGGATATGTATGACTTCATGGCTTTAGACAGACCATCTACTCCTCTTATAGACCGTGGTATAGCATTACACAAAATGATTAGGCTTATCACCATGGGCCTCGGTGGTGAAGGGTACTTGAATTTTATGGGAAATGAATTCGGCCATCCTGAGTGGATTGACTTTCCCAGGGGTGATCAACATCTTCCTAATGGCTCAGTAGTTCCTGGGAATAATAACAGTTATGATAAATGCAGGCGTAGATTTGACTTGGGGGATGCAGAATTTCTAAGATATCGGGGGATGCAAGAATTTGATCAAGCCATGCAGCACCTAGAAGAAAGCTTTGATTTCATGACTTCGGAGAACCAATATATTTCACGGAAAGATGAAAATGACAGAGTTATAGTCTTTGAAAGAGGCAACCTTGTCTTTGTATTCAACTTTCATTGGACGAACAGCTATTCAGATTACAAAATTGGCTGCTTTTACCCAGGGAAATATAAGATTGTCTTGGATTCAGATGATGCCTTGTTTGGTGGCTTCAATAGGCTCGATCACACTGCTGAGTACTTCACCTCTGATGGATGGTATGATGACAGACCACGATCCTTTCTTGTGTATGCACCTTCTAGAACAGCAGTGGTGTACGCCCTCGCTGATAAAGCTGAACCAGTGCTAGTCAAACCATGA 2601 0.4195 MAYTISGIRFPVVPSSVHKPSQPSFFHGDRTRGASLSFFLNKNDSFSRKILAVKVSPDSDSTSSTIAESDKVLIPQDEDNSSSLTDQHETPDIISEGPESVQNEEDLTLEDENKYNDDEAASSYREDEDVQDSFVSSFLDVNAHAQAETTSVSIDRKVKIKSDEVKSKIIPPPGTGKKIYEIDPFLHAHSEHLDFRYGQYKRLREKIDKYEGGLDAFSRGYEKFGFTRSETGITYREWAPGAKTAALVGDFNGWNPNVDEMVRNEFGVWEIFLPNNVDGSPAIPHGSRVKIRMTTPSGVKDSIPAWIKFSVQASGEIPYNGIYYDPPEEEKYVIKHPQPKRPKSLRIYESHVGMSSPEPKINTYANFRDDVLPRIKKLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPDELKSLIDRAHELGLLVLMDIVHSHASSNTLDGLNLFDGTDSHYFHPGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYKFDGYRFDGVTSMMYTHHGLEVTFTGNYSEYFGFATDVDAVVYLMLVNDLIHGLFPEAVTIGEDVSGMPAFCIPTQDGGIGFDYRLHMAIADKWIELLKKQDEDWRMGDIIHTLTNRRWREKCVAYAESHDQALVGDKTLAFWLMDKDMYDFMALDRPSTPLIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQHLPNGSVVPGNNNSYDKCRRRFDLGDAEFLRYRGMQEFDQAMQHLEESFDFMTSENQYISRKDENDRVIVFERGNLVFVFNFHWTNSYSDYKIGCFYPGKYKIVLDSDDALFGGFNRLDHTAEYFTSDGWYDDRPRSFLVYAPSRTAVVYALADKAEPVLVKP 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1210 866 SUPERFAMILY Glycosyl hydrolase domain 758 856 - -
Lal11g1210 866 CDD AmyAc_bac_euk_BE 328 743 - -
Lal11g1210 866 CDD E_set_GBE_euk_N 230 324 - -
Lal11g1210 866 Gene3D - 757 863 IPR013780 -
Lal11g1210 866 MobiDBLite consensus disorder prediction 114 129 - -
Lal11g1210 866 SMART aamy 362 722 IPR006047 GO:0005975
Lal11g1210 866 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 2-1, CHLOROPLASTIC/AMYLOPLASTIC 14 858 - -
Lal11g1210 866 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 223 306 IPR004193 GO:0004553|GO:0005975
Lal11g1210 866 Pfam Alpha amylase, C-terminal all-beta domain 761 854 IPR006048 GO:0003824|GO:0005975|GO:0043169
Lal11g1210 866 Gene3D Immunoglobulins 219 331 IPR013783 -
Lal11g1210 866 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 14 858 IPR037439 GO:0003844|GO:0005978
Lal11g1210 866 SUPERFAMILY E set domains 217 315 IPR014756 -
Lal11g1210 866 MobiDBLite consensus disorder prediction 57 129 - -
Lal11g1210 866 PIRSF GlgB 108 862 IPR037439 GO:0003844|GO:0005978
Lal11g1210 866 Pfam Alpha amylase, catalytic domain 372 443 IPR006047 GO:0005975
Lal11g1210 866 Gene3D Glycosidases 183 752 - -
Lal11g1210 866 SUPERFAMILY (Trans)glycosidases 336 752 IPR017853 -
Lal11g1210 866 MobiDBLite consensus disorder prediction 57 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1210 Lal-Chr11 15840793 15868080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1210 20 857 Glycoside Hydrolase AT5G03650 75.298 0.0 1301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1210 K00700 - gmx:100785968 1526.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1210 11 15840793 15868080 Lal11g1210 11 15840793 15868080 ECH
Lal11g1210 11 15840793 15868080 Lal20g0144 20 949280 963636 LSH