Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1170 ATGAAGAAAAGAGAGCGAGTCATTCAGATGGACAATACCTTTCTCTTCACCTCAGAGTCCGTCAATGAGGGCCACCCCGACAAGCTCTGTGACCAAGTTTCAGATGCCATCCTCGACGCTTGCTTGGAGCAAGACCCAGAGAGCAAGGTCGCCTGTGAGACTTGTACAAAAACTAACATGGTTATGGTCTTTGGTGAGATCACCACCAAGGCTAAAGTGAACTATGAGAAAATTGTTAGAGACACTTGCAGGGGCATTGGGTTTGTGTCAGCTGATGTTGGTCTTGATGCAGACAAGTGCAATGTTCTTGTCAACATTGAGCAACAGAGCCCTGATATTGCCCAAGGAGTTCATGGTCACATGACCAAAGCACCTGAGGAGATTGGAGCTGGTGACCAAGGCCACATGTTTGGCTATGCCACAGATGAAACACATGAGCTTATGCCACTTACTCATGTGCTGGCTACTAAACTTGGTGCCAAGCTCACTGAAGTCAGAAAGAACAAAACATGCCCGTGGTTGAGGCCTGATGGTAAAACCCAAGTCACTGTTGACTACAGGAATGATAATGGCGCCATGGTCCCTCTCCGTGTGCACACAATCCTCATCTCAACTCAACATGATGAAACTGTTACAAATGAACAGATTGCAGCAGACTTGAAAGAGCATGTGATTAAACCCGTGATCCCAACTCAATATCTTGATGACAAGACCATCTTCCACCTCAACCCCTCCGGTCGATTTGTGATCGGAGGACCCCATGGAGATGCTGGTCTAACCGGTCGGAAGATCATTATCGACACCTATGGTGGTTGGGGTGCTCATGGTGGAGGTGCTTTCTCTGGCAAGGACCCTACCAAGGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCAGCGAAGAGCGTTGTAGCTTCAGGGCTTGCCCGACGTTGTATCGTGCAGGTTTCTTATGCAATAGGAGTCCCAGAGCCATTGTCTGTGTTTGTAGACACCTACAAAACAGGAAAGATTCCAGACAAGGACATTCTGGCTCTAATTAAGGAGAACTTTGACTTCAGGCCAGGAATGATTGCCATCCATCTTGACCTCACAAGAGGAGGCAACTTCAGGTACCAGAAGACTGCTGCTTATGGACATTTTGGACGTGATGATCCTGATTTTACTTGGGAGACAGTAAAGGCACTCAAGCCAAAGGCTTAA 1203 0.4771 MKKRERVIQMDNTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFVSADVGLDADKCNVLVNIEQQSPDIAQGVHGHMTKAPEEIGAGDQGHMFGYATDETHELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVDYRNDNGAMVPLRVHTILISTQHDETVTNEQIAADLKEHVIKPVIPTQYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKENFDFRPGMIAIHLDLTRGGNFRYQKTAAYGHFGRDDPDFTWETVKALKPKA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1170 400 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 12 398 - -
Lal11g1170 400 Gene3D - 21 289 - -
Lal11g1170 400 SUPERFAMILY S-adenosylmethionine synthetase 13 119 IPR022636 GO:0004478|GO:0006556
Lal11g1170 400 ProSitePatterns S-adenosylmethionine synthase signature 1. 129 139 IPR022631 GO:0004478|GO:0006556
Lal11g1170 400 ProSitePatterns S-adenosylmethionine synthase signature 2. 276 284 IPR022631 GO:0004478|GO:0006556
Lal11g1170 400 SUPERFAMILY S-adenosylmethionine synthetase 250 396 IPR022636 GO:0004478|GO:0006556
Lal11g1170 400 TIGRFAM metK: methionine adenosyltransferase 15 397 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lal11g1170 400 Pfam S-adenosylmethionine synthetase, C-terminal domain 250 391 IPR022630 GO:0004478|GO:0006556
Lal11g1170 400 Hamap S-adenosylmethionine synthase [metK]. 12 400 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lal11g1170 400 Pfam S-adenosylmethionine synthetase, N-terminal domain 14 111 IPR022628 GO:0004478|GO:0006556
Lal11g1170 400 CDD S-AdoMet_synt 15 394 - -
Lal11g1170 400 PIRSF MAT 8 400 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lal11g1170 400 SUPERFAMILY S-adenosylmethionine synthetase 126 249 IPR022636 GO:0004478|GO:0006556
Lal11g1170 400 Gene3D - 14 252 - -
Lal11g1170 400 Gene3D - 127 391 - -
Lal11g1170 400 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 12 398 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lal11g1170 400 Pfam S-adenosylmethionine synthetase, central domain 127 248 IPR022629 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1170 Lal-Chr11 15432030 15435986 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1170 K00789 - csv:101222328 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1170 11 15432030 15435986 Lal11g1170 11 15432030 15435986 ECH
Lal11g1170 11 15432030 15435986 Lal1g1801 1 20354453 20355637 LSH