Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1156 ATGACGACGGCGATCAATAGTAATAGTTCCAACGGAGTTCTGTCACCGGCGGCGCAGTCTCCGGTGGGGTTGAAGACGTATTTCAAAACACCTGAAGGGAGGTATAAGCTTCAATATGAGAAGACTCATCCTTCTTCTCTTCTTCATTACGCTCATGGAAAACCGTTACTCAGGAAAAGTCATCACCTTCAACTCCAACTGCATCGTCATCTTCAAGTTTTAGTGCCAGCAGCAGCTAGATTATTGGGGGGAAGCAATGGAAGTCGAGCACTTAGTTTTGTTGGAGTTAATGGTAGCACCAGCAAGACCAATGGAGGAACCACAAGGATTGTTTCAATGGGTGCCTCAACTTCAAGTAGTCCAATGGCAAATTCGAATTTCGATGGGAAAGGAACTTACTTGATCTTCAATGTTGGGGATGCAATTTTCATAAGTGATTTGAACTCTCAAGACAAGGATGCTAAGGATGGACATGATTTGCTGATTGGCTTGAGCTCTGGTGATGTCTACTCAGTGTCACTGAGACAGCAATTACAGGATGTTGTCGTTGTACTTGTATTGCTTGGGTGCCAGGAGAACAAAGATGGGGTTGGTGATTCTTCATTTCCTGTTGTCAAAGATCAATCCCAATTTTCTGTTGCCCATGCACGTTACAGTAAGAGTAATCCAACAGCCAGATGGCATATATGCCAGGTCTCAATTAACAGTATTTCTTTCTCAAGCGGCGGGGCATACTTAGCAACTGTTGGAAGAGATGAAAGTAACAATATTTGTTTACTGAAATACATTCAAGTTACTTACGAGTGTTTGATTACACAAAAGAGCTACTTATATGTGGTGAGAAAGGTTATTATGGGGCTTTGTTATGTTGTGCTTGGAGGAGAAGATGATTTAGTTCAAGTTTGGAGCATGGAAGATCGCAAGGTTGTGGCATGGGGCGAGGGACATAACTCATGGGTAAGTGGAGTGGCTTTTGATTCGTATTGGTCATCACCAAATGCAAGTGACAATGGAGAAACCCTTATGTATCGGTTTGGTTCTGTTGGTCAGACAATTTTTAAAAATAAGTTGCTGTTTCTGCTCTGCTCGTGTAGATGTTGGCTGATTGCTAGAATTGTTGAAACTAAGATTTTTGTGTGGTCAGGATACACAATTCTTTTGTGGGACCTGGAAATGGATGAGATCGTAGTGCCCTTGCGGCGTCCTCCTGGTGTATCGCCAACTTACAATACCGGAAGCCAGTCATCCCACTGGGACAGTGCTATCCCCTTTGGCACCTTGCAACCTGCTCCAAGTATGCGTGATGTTCCAAAAATCTCTCCTTTGGTTGCTCACCATGTGCATACAGAATCACTCACAGGCTTGATATTTACTCAAGAATATGTACTTACTGCGTGTCGGGAGGGGCACATAAAAGTCTGTATGAGACCTGGGGTTGCTGAGAGCCAATCGAGCAACTCCCAAACCTTGTTAGCTACCAGCCTTAAGGAGAAGCCTACACTGTCAAGCAAGATAAACAATTCTATCTACAAATAA 1536 0.4349 MTTAINSNSSNGVLSPAAQSPVGLKTYFKTPEGRYKLQYEKTHPSSLLHYAHGKPLLRKSHHLQLQLHRHLQVLVPAAARLLGGSNGSRALSFVGVNGSTSKTNGGTTRIVSMGASTSSSPMANSNFDGKGTYLIFNVGDAIFISDLNSQDKDAKDGHDLLIGLSSGDVYSVSLRQQLQDVVVVLVLLGCQENKDGVGDSSFPVVKDQSQFSVAHARYSKSNPTARWHICQVSINSISFSSGGAYLATVGRDESNNICLLKYIQVTYECLITQKSYLYVVRKVIMGLCYVVLGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNASDNGETLMYRFGSVGQTIFKNKLLFLLCSCRCWLIARIVETKIFVWSGYTILLWDLEMDEIVVPLRRPPGVSPTYNTGSQSSHWDSAIPFGTLQPAPSMRDVPKISPLVAHHVHTESLTGLIFTQEYVLTACREGHIKVCMRPGVAESQSSNSQTLLATSLKEKPTLSSKINNSIYK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1156 511 PANTHER WD REPEAT PROTEIN 7 153 - -
Lal11g1156 511 PANTHER WD REPEAT PROTEIN 151 186 - -
Lal11g1156 511 PANTHER WD REPEAT PROTEIN 192 352 - -
Lal11g1156 511 PANTHER WD REPEAT PROTEIN 384 509 - -
Lal11g1156 511 PANTHER LOW QUALITY PROTEIN: WD REPEAT-CONTAINING PROTEIN 20-LIKE 151 186 - -
Lal11g1156 511 PANTHER LOW QUALITY PROTEIN: WD REPEAT-CONTAINING PROTEIN 20-LIKE 7 153 - -
Lal11g1156 511 PANTHER LOW QUALITY PROTEIN: WD REPEAT-CONTAINING PROTEIN 20-LIKE 384 509 - -
Lal11g1156 511 PANTHER LOW QUALITY PROTEIN: WD REPEAT-CONTAINING PROTEIN 20-LIKE 192 352 - -
Lal11g1156 511 Gene3D - 17 483 IPR015943 GO:0005515
Lal11g1156 511 SUPERFAMILY WD40 repeat-like 131 473 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1156 Lal-Chr11 15243278 15248148 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1156 K24741 - gmx:100782580 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1156 11 15243278 15248148 Lal11g1156 11 15243278 15248148 ECH
Lal11g1156 11 15243278 15248148 Lal1g1819 1 20549721 20555056 LSH
Lal11g1156 11 15243278 15248148 Lal20g0089 20 563747 568928 LSH