Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1067 ATGGCGTCGTGGTGCGCTGCAAGGTGCTTCCGCATCCCGGCGATGAACTACGGTGATCTTGGCCGCCGCGCTTCGTTTGCCGCCGGAATAGGAGAAACATCAATGGGCGGTGCCTTGTGCCGTTCTAACAGCTCAGCCCCTTTTGCTTGCTTCAGCACTTCCACTCATACCAGTATCAAGGAAGCTGTTCAGACTGAAAAGGCACCAGCGGCTCTGGGGCCATATTCTCAAGCAATAAAAGCTAACAATCTTCTATTTGTATCAGGTGTTCTTGGTCTTGTTCCTGAGACAGGGAAGTTTCTCTCTGATAATGTTGAAGATCAAACAGAGCAGCTTCTAAAAAATATGGGGGAAATCCTAAAATCAGGTGGTGCCTGCTATGCATCAGTTGTCAAGACAACAATTTTGTTAGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAATACTTCCCTTCACCCGCCCCAGCTCGTTCAACATATCAAGTCGCCGCCTTGCCATTGGATGCCAAGATTGAAATTGAGTGCATAGCTGCACTATGA 552 0.4746 MASWCAARCFRIPAMNYGDLGRRASFAAGIGETSMGGALCRSNSSAPFACFSTSTHTSIKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLVPETGKFLSDNVEDQTEQLLKNMGEILKSGGACYASVVKTTILLADLKDFKKVNEIYAKYFPSPAPARSTYQVAALPLDAKIEIECIAAL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1067 183 CDD YjgF_YER057c_UK114_family 75 181 - -
Lal11g1067 183 SUPERFAMILY YjgF-like 60 183 IPR035959 -
Lal11g1067 183 Gene3D - 55 182 IPR035959 -
Lal11g1067 183 ProSitePatterns Uncharacterized protein family UPF0076 signature. 159 177 IPR019897 -
Lal11g1067 183 PANTHER BNAA05G36080D PROTEIN 30 183 - -
Lal11g1067 183 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 60 182 IPR006056 -
Lal11g1067 183 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 30 183 IPR006175 -
Lal11g1067 183 Pfam Endoribonuclease L-PSP 66 182 IPR006175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1067 Lal-Chr11 14292832 14297520 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1067 K09022 - gmx:100785544 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1067 11 14292832 14297520 Lal11g1067 11 14292832 14297520 ECH
Lal3g0919 3 9309822 9314365 Lal11g1067 11 14292832 14297520 LSH