Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0715 ATGGCACCCTTTATTCTCTATGTTCTATTATCCCATTTATCGATTCAAACCAGTGGGTATGTTCAACCCAATGAAGAAGGTTTAATATCTGGGATCATAACTGATAAGGGTCTTGATTATGCCAAGGATTTGTTGATAGAGGAAGGTATTGCCTCTGTTATTCAGCTTCAGCTCCCAGAGATTGAGAACTCTATACAAGTTCCACTTGTTGGAAATGCTAATGTGATTCTTTCTAACATCACAATCAAGGGTATTAAAGTCAATTCATCAACTGTTGAAACTGGAGAGAGTGGCATAGTTATATCTGTTTCAGGTGCCACTGCCAATTTGAGTATGAGGTGGAGGTATTCTGTTAGCAGTTGGTTAATCCCAATTGGGGTTTCAGATAGTGGGACTGCAACAGTAAAGGTTAAAGATATGCAAGTGGGGCTTACAGTAAATTTAACGAACAACGAAGGAACTCTTAAGTTGTTTCTCTTAGATTATGGATGTTATGTGAGAGACTTATCTATAAAGTTGGAGGGAGGAGCATCTTGGCTTTACCAAGTGATAGTGGATGCTTTTGAAGGGAACATAGCATCTTCAGTTGAAAATGCCATTACAGAAAAAATAAGAGAAGGGATAGAGAAGCTTGACAATTTATTGCAATATCTTCCAAAGCAAATCTCACTAGACAAAACTGCTACCTTAAATGTTTCTTTCATGGGGAATCCTGTGTTGAGCAACTCTTCTATTGGAATTTCAGTTAATGGTTTATTCACAGAGAGAAATGAAGTTTCAGTACCTCAAATTTACCAGAAAGAATTTGAGATTTCTTCTGCATGTGGTGGCTTACTAAAGATGATCAAGGTTTCAATACATGAAAATGTGTTCAAATCTGCTTCTCTGGTTTACTTCAATTTAGGCAGAATGCAATTGGTTATTGATGAATTACCTGAGAAGGCTATTTTGAACACTGCTGAGTGGAGATTCATTGTTCCTCAATTATACAAGACTTATCCAAATGATGATATGCAGCTTAATATCACTGTATCTTCCCCACCAGTTATACAAGTGACCAACCAAGATATCGGCGCAACGATTTTTGTCGATATAACAATTGATGTTCTGGAAGATGGTGAAGTTACTCCTGTTGCATGCATCTCAGTGGATATTAGTGCTTCATGTGCTGTGGAAATCGTAGGAAACAGGATTGTTGGTAGGCTCAAATTACAAAAGTTTTCTGTGTACTTGAAATGGAGCAAAATAGGGAAACTGCACATGAAACTTATTCAGCCACTAATGACAACTACCCTCAAAACTGTCATCATACCATACCTGAATTTTCAATTAAAGAGAGGACTCCCATTGCCAATTATTGATGGTTTTGCTTTTCAGAAGGCAAATATCTTGTATGCTCCTCCATGGATTGCAGCATTCAGTGATGTTTCCTACTTAGGATTAGGAGAATACTATCTCAACCACCAAGAAGCTCAACTATTATAA 1485 0.3744 MAPFILYVLLSHLSIQTSGYVQPNEEGLISGIITDKGLDYAKDLLIEEGIASVIQLQLPEIENSIQVPLVGNANVILSNITIKGIKVNSSTVETGESGIVISVSGATANLSMRWRYSVSSWLIPIGVSDSGTATVKVKDMQVGLTVNLTNNEGTLKLFLLDYGCYVRDLSIKLEGGASWLYQVIVDAFEGNIASSVENAITEKIREGIEKLDNLLQYLPKQISLDKTATLNVSFMGNPVLSNSSIGISVNGLFTERNEVSVPQIYQKEFEISSACGGLLKMIKVSIHENVFKSASLVYFNLGRMQLVIDELPEKAILNTAEWRFIVPQLYKTYPNDDMQLNITVSSPPVIQVTNQDIGATIFVDITIDVLEDGEVTPVACISVDISASCAVEIVGNRIVGRLKLQKFSVYLKWSKIGKLHMKLIQPLMTTTLKTVIIPYLNFQLKRGLPLPIIDGFAFQKANILYAPPWIAAFSDVSYLGLGEYYLNHQEAQLL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0715 494 SMART bpi1_3 33 258 IPR017942 GO:0008289
Lal11g0715 494 PIRSF Lipid_binding_protein 4 482 IPR030675 GO:0005615|GO:0008289
Lal11g0715 494 Gene3D - 36 216 - -
Lal11g0715 494 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 490 - -
Lal11g0715 494 Pfam LBP / BPI / CETP family, C-terminal domain 280 461 IPR001124 GO:0008289
Lal11g0715 494 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 32 242 IPR017943 GO:0008289
Lal11g0715 494 Pfam LBP / BPI / CETP family, N-terminal domain 37 211 IPR017942 GO:0008289
Lal11g0715 494 SMART bpi2_2 276 481 IPR001124 GO:0008289
Lal11g0715 494 PANTHER OS06G0309200 PROTEIN 1 490 IPR045897 -
Lal11g0715 494 Gene3D - 33 463 - -
Lal11g0715 494 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 249 478 IPR017943 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0715 Lal-Chr11 7013050 7019968 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0715 K05399 - gmx:100815362 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0715 11 7013050 7019968 Lal11g0715 11 7013050 7019968 ECH
Lal11g0715 11 7013050 7019968 Lal18g1592 18 17444922 17451890 PCT
Lal18g1592 18 17444922 17451890 Lal11g0715 11 7013050 7019968 PCT