Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal10g1223 | ATGTTGCAACAGCAGCAGCAGAAGAAGAATAAGAAAAGCGATACTGAAAACAATAATAATAATAAGAAGGATGAAAGAAAGAAAGAAGAAACTCCAATGACTGTGATACTGAAGGTTGACACGCATTGCGATACTTGTCGTTCTAAAATCGCACGTTGTCTTCGTGGTTCTCATGCCTCGTCATCGTCGAACATGAACATGAAATTGAACGTGGTTGTTGTGGAAGGAGAGTGTGGTAAAGTGGACCCCACTAAACTCACAGAAAAACTTTCCAACAAGATGAAGAACAAAGTTGATCTCGTTTCACCTCATCCAAACAAAAATCACTCCAAACCTGAAGACAACAAATCCAAACAGCCTCCGGTGGTTAATACGGTTGTCCTGAAGGTGGCGATGCACTGCCAAGGATGCATTGAGAGGATTCGCAAAACTGTTTTGAAGACCAAAGGGGTTCAGGACATGGCTATAGACAAGGAGAAGGAAACGGTGACAGTGAAAGGAACAATGGAGGTGAAGGCTTTAGTGGGGAATTTGATGGAGAGATTAAAGAAGAAGGTTGAGGTGGTCCCTCCTAAGAAAGAGAAGGAGGAAAATGGTGATAAAAAAGGTGCAACTGATAAAGGAGGGAATGGTGACTCTAAGAAGAAGAAAGGTGGTGGTGGTGGTGGTGGAGGAGGAGGAGATAATGTTAAGGATGACAAGGGTAGTGGTGGTGATGGCCAGGGGAAAGGGAAGATAGAGCAGAACAAGATGGAGCCTTTGGTAAAAGTACATGATCCAGTTTATGGTTATGGCTATGGCTATTATGGCTATGGTGGTGACTATAACTATGAGCCAGTTTACATGGGGCAGTTGCATGCACCACAGTTTTTCAGTGATGAAAATCCCAATGCTTGCTCCATTATGTGA | 909 | 0.4323 | MLQQQQQKKNKKSDTENNNNNKKDERKKEETPMTVILKVDTHCDTCRSKIARCLRGSHASSSSNMNMKLNVVVVEGECGKVDPTKLTEKLSNKMKNKVDLVSPHPNKNHSKPEDNKSKQPPVVNTVVLKVAMHCQGCIERIRKTVLKTKGVQDMAIDKEKETVTVKGTMEVKALVGNLMERLKKKVEVVPPKKEKEENGDKKGATDKGGNGDSKKKKGGGGGGGGGGDNVKDDKGSGGDGQGKGKIEQNKMEPLVKVHDPVYGYGYGYYGYGGDYNYEPVYMGQLHAPQFFSDENPNACSIM | 302 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal10g1223 | 302 | PANTHER | HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 | 16 | 302 | - | - | |
| Lal10g1223 | 302 | MobiDBLite | consensus disorder prediction | 9 | 33 | - | - | |
| Lal10g1223 | 302 | Pfam | Heavy-metal-associated domain | 128 | 187 | IPR006121 | GO:0046872 | |
| Lal10g1223 | 302 | Gene3D | - | 120 | 196 | - | - | |
| Lal10g1223 | 302 | Coils | Coil | 5 | 25 | - | - | |
| Lal10g1223 | 302 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
| Lal10g1223 | 302 | MobiDBLite | consensus disorder prediction | 186 | 251 | - | - | |
| Lal10g1223 | 302 | MobiDBLite | consensus disorder prediction | 186 | 214 | - | - | |
| Lal10g1223 | 302 | CDD | HMA | 127 | 167 | IPR006121 | GO:0046872 | |
| Lal10g1223 | 302 | ProSiteProfiles | Heavy-metal-associated domain profile. | 132 | 187 | IPR006121 | GO:0046872 | |
| Lal10g1223 | 302 | MobiDBLite | consensus disorder prediction | 232 | 251 | - | - | |
| Lal10g1223 | 302 | SUPERFAMILY | HMA, heavy metal-associated domain | 122 | 185 | IPR036163 | GO:0046872 | |
| Lal10g1223 | 302 | SUPERFAMILY | HMA, heavy metal-associated domain | 32 | 92 | IPR036163 | GO:0046872 | |
| Lal10g1223 | 302 | MobiDBLite | consensus disorder prediction | 96 | 121 | - | - | |
| Lal10g1223 | 302 | PANTHER | HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 | 16 | 302 | IPR044594 | GO:0046872 | |
| Lal10g1223 | 302 | MobiDBLite | consensus disorder prediction | 96 | 116 | - | - | |
| Lal10g1223 | 302 | Gene3D | - | 28 | 108 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal10g1223 | Lal-Chr10 | 18571879 | 18573258 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal10g1223 | - | - | aprc:113856391 | 231.491 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal10g1223 | 10 | 18571879 | 18573258 | Lal10g1223 | 10 | 18571879 | 18573258 | ECH | |
| Lal10g1223 | 10 | 18571879 | 18573258 | Lal1g0396 | 1 | 2428980 | 2430832 | PCT | |
| Lal1g0396 | 1 | 2428980 | 2430832 | Lal10g1223 | 10 | 18571879 | 18573258 | PCT |