Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1144 ATGCCTCTCAGACTCGAAATCAAGCGAAAGCTTGCGCAAAGATCAGAAAGAGTAAAATCTGTGGATCTGCATCCAACAGAACCATGGATTCTGGCAAGTTTGTACTCGGGGACTGTCTGTATTTGGAACTACCAATCTCAGATAATGGCCAAATCTTTTGAGGTTACAGAGTTACCAGTCCACTGGGGCATATACAACATGGATTTTGCAGTTAGGTCAGCCAAGTTTATTGCACGCAAACAGTGGGTTGTTGCTGGCGCAGATGATATGTTCATTCGTGTATATAATTACAACACAATGGATAAAGTCAAAGTATTTGAGGCACATACAGATTACATTAGGTGTGTGGCAGTTCACCCCACCCTTCCTTATGTGCTGTCATCATCTGATGATATGCTCATAAAGCTTTGGGATTGGGAAAAAGGCTGGGTTTGTACCCAGATATTTGAGGGACATTCTCATTATGTCATGCAAGTGACATTCAATCCTAAAGATACCAACACCTTTGCCAGTGCATCTCTTGACCGCACTATAAAGATTTGGAATCTTGGATCTCCTGACCCGAATTTTACATTGGATGCCCATCAAAAAGGAGTGAACTGCGTTGATTACTTTACAGGTGGTGACAAACCTTATCTCATCACTGGTTCTGATGATCACACTGCCAAGGTATGGGATTATCAGACCAAAAGTTGTGTCCAGACTCTAGAAGGTCACACACACAATGTGTCTGCTGTATGCTTTCATCCTGAACTTCCTATAATCATTACTGGCTCCGAGGATGGCACAGTACGCATATGGCACTCAACAACTTATAGGCTTGAGAATACACTGAACTACAGTCTTGAAAGAGTATGGGCTATTGGATACTTGAAGAGTTCACGTCGGGTTGTGATTGGCTATGACGAAGGAACAATTATGGTCAAACTTGGTCGAGAAGTACCTGTGGCTAGCATGGACAACAGTGGGAAAATTATTTGGGCTAAGCATAATGAAATTCAGACAGTCAATATAAAGAGTGTAGGAGTAGATGTGGAGATTGCTGATGGAGAAAGATTACCTTTGGCTGTTAAGGAGTTGGGCAATTGTGATCTCTACCCACAAAATTTAAAGCACAACCCCAATGGGAGATTTGTTGTTGTATGTGGAGATGGTGAGTATATTATATACACTGCACTGGCATGGAGAAATAGGTCATTTGGTTCGGCACTGGAATTTGTTTGGTCTCCGGATGGAGAATATGCTATCAGAGAAAGTACATCGAAGATTAAAATTTTCAGCAAAAGTTTCCAGGAAAAGAGGAGTGTCCGACCAACATTTTCAGCTGAACGAATATTTGGTGGCACTTTGCTGGCAATGTGCTCAAATGATTTCATCTGCTTTTATGATTGGGCTGAGTGCAGGTTGATCTATCGCATTGATGTCAATGTGAAGAACCTCTACTGGGCTGATAGTGGTGATCTTGTAACAATCGCAAGTGATACATCATTCTACATTCTGAAGTACAATCGTGATGTTGTTGCATCACATTTAGATAGTGGAAGACCTTTAGATGAGGAAGGTGTTGAAGATGCTTTTGAGCTTCTTCATGAAACGAATGAACGTGTCAGGACAGGGATCTGGGTTGGGGATTGTTTTATCTACAACAATTCCTCTTGGAGACTTAATTACTGTGTTGGTGGTGAGGTAACTACGATGTTTCATTTGGACCGCCCTATGTACCTGTTGGGATATCTTGCAAACCAAAGTCGGGTGTATTTGATTGACAAAGAGTTTAATGTTATTGGATACACACTGCTTTTAAGCTTGATTGAGTACAAGACACTTGTGATGCGTGGTGATTTAGAAAGGGCAAATGAAGTTCTACCATCCATTCCTAAAGAGCATCACAACAGTGTTGCTCGTTTCCTGGAATCACGAGGGATGATAGAGGAAGCTCTTGAAGTAGCTACTGACCCTGACTACAAATTTGATTTAGCAATACAGCTCGGAAGATTAGATGTTGCAAAGTCTATTGCCGTAGAAGTGCAGAGTGAGTCTAAATGGAAGCAGTTGGGAGAATTAGCCATGTCTAGTGGAAAGTTGGCAATGGCTGAGGAATGTTTAGAGTATGCAATGGATTTGAGTGGGTTGTTACTGCTATATTCTTCTTTGGGAGATGCTGAAGGAATATCCAAACTTGCAACCCTTGCTAAGGAGCAAGGGAAGAACAATGTCTCATTCCTTTGCTTATTTATGTTGGGTAAACTTGAAGACTGCCTTCAACTGTTGGTAGAAAGCAATCGAATTCCGGAGGCAGCTTTAATGGCTCGTTCTTATCTCCCAAGCAAGGTCTCTGAGATAGTGGCAATATGGAGAAAAGATCTTAATAAGGTTAATCCAAAAGCTGCTGAGTCGTTGGCTGATCCTGAGGAATATCCTAATCTGTTTGAAGACTGGCAAGTTGCACTTGCTGTTGAATCTAAAGCTGCAGAATCAAGGAATGTTTACCCTCCTGCAGAGCAGTACATCAGCCATGCTGACAAGTCACATGTTACCCTTGTTGAAGCTTTCAGAAACATGCAGATTGAAGAAGGAGACGAGCCTCTTGAGAATGGGGACTCAAGTCATGGGTTGACAGAGCAAAATGGAGAAGATGACTATGCAGAGGCACTGGAAGAACCAAATGGAGAGGAAGGAAGCCAAGAGGAGGCAGTTGTAGTGGATGCTGATTCTACAGATGGTGCAGTACTCGTTAATGGTAACGAGGTTGACGAAGAGTGGGGTACGAATAATGAAGGAGCCCCGTCAGCCTAA 2796 0.4235 MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQIMAKSFEVTELPVHWGIYNMDFAVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYSLERVWAIGYLKSSRRVVIGYDEGTIMVKLGREVPVASMDNSGKIIWAKHNEIQTVNIKSVGVDVEIADGERLPLAVKELGNCDLYPQNLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSPDGEYAIRESTSKIKIFSKSFQEKRSVRPTFSAERIFGGTLLAMCSNDFICFYDWAECRLIYRIDVNVKNLYWADSGDLVTIASDTSFYILKYNRDVVASHLDSGRPLDEEGVEDAFELLHETNERVRTGIWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVIGYTLLLSLIEYKTLVMRGDLERANEVLPSIPKEHHNSVARFLESRGMIEEALEVATDPDYKFDLAIQLGRLDVAKSIAVEVQSESKWKQLGELAMSSGKLAMAEECLEYAMDLSGLLLLYSSLGDAEGISKLATLAKEQGKNNVSFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVESKAAESRNVYPPAEQYISHADKSHVTLVEAFRNMQIEEGDEPLENGDSSHGLTEQNGEDDYAEALEEPNGEEGSQEEAVVVDADSTDGAVLVNGNEVDEEWGTNNEGAPSA 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1144 931 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 192 229 - -
Lal10g1144 931 PIRSF Beta'-COP 2 904 IPR016453 -
Lal10g1144 931 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 236 267 - -
Lal10g1144 931 Gene3D - 11 311 IPR015943 GO:0005515
Lal10g1144 931 PANTHER COATOMER 1 885 - -
Lal10g1144 931 ProSiteProfiles Trp-Asp (WD) repeats profile. 192 235 IPR001680 GO:0005515
Lal10g1144 931 SUPERFAMILY WD40 repeat-like 238 505 IPR036322 GO:0005515
Lal10g1144 931 MobiDBLite consensus disorder prediction 860 931 - -
Lal10g1144 931 Pfam WD domain, G-beta repeat 102 138 IPR001680 GO:0005515
Lal10g1144 931 Pfam WD domain, G-beta repeat 231 267 IPR001680 GO:0005515
Lal10g1144 931 Pfam WD domain, G-beta repeat 188 226 IPR001680 GO:0005515
Lal10g1144 931 Pfam WD domain, G-beta repeat 144 182 IPR001680 GO:0005515
Lal10g1144 931 MobiDBLite consensus disorder prediction 860 877 - -
Lal10g1144 931 MobiDBLite consensus disorder prediction 879 893 - -
Lal10g1144 931 Pfam Coatomer WD associated region 330 774 IPR006692 GO:0005198|GO:0006886|GO:0016192|GO:0030117
Lal10g1144 931 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 149 183 - -
Lal10g1144 931 PANTHER COATOMER SUBUNIT BETA' 1 885 - -
Lal10g1144 931 Gene3D - 601 809 - -
Lal10g1144 931 ProSiteProfiles Trp-Asp (WD) repeats profile. 149 191 IPR001680 GO:0005515
Lal10g1144 931 ProSiteProfiles Trp-Asp (WD) repeats profile. 236 277 IPR001680 GO:0005515
Lal10g1144 931 SMART WD40_4 99 138 IPR001680 GO:0005515
Lal10g1144 931 SMART WD40_4 4 43 IPR001680 GO:0005515
Lal10g1144 931 SMART WD40_4 56 96 IPR001680 GO:0005515
Lal10g1144 931 SMART WD40_4 185 226 IPR001680 GO:0005515
Lal10g1144 931 SMART WD40_4 229 268 IPR001680 GO:0005515
Lal10g1144 931 SMART WD40_4 142 182 IPR001680 GO:0005515
Lal10g1144 931 PRINTS G protein beta WD-40 repeat signature 169 183 IPR020472 -
Lal10g1144 931 PRINTS G protein beta WD-40 repeat signature 213 227 IPR020472 -
Lal10g1144 931 PRINTS G protein beta WD-40 repeat signature 255 269 IPR020472 -
Lal10g1144 931 CDD WD40 17 308 - -
Lal10g1144 931 ProSiteProfiles Trp-Asp (WD) repeats profile. 106 138 IPR001680 GO:0005515
Lal10g1144 931 SUPERFAMILY WD40 repeat-like 3 308 IPR036322 GO:0005515
Lal10g1144 931 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 106 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1144 Lal-Chr10 18151706 18162604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1144 147 308 Miscellaneous Gene Families AT5G08390 24.691 9.05e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1144 K17302 - gmx:106794271 1765.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1144 10 18151706 18162604 Lal10g1144 10 18151706 18162604 ECH
Lal10g1144 10 18151706 18162604 Lal1g1273 1 14107462 14120091 PCT
Lal10g1144 10 18151706 18162604 Lal18g0191 18 1569994 1581734 PCT
Lal1g1273 1 14107462 14120091 Lal10g1144 10 18151706 18162604 PCT
Lal18g0191 18 1569994 1581734 Lal10g1144 10 18151706 18162604 PCT