Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0637 ATGGCTGCCACGACGTCCTCCGTTTCTAATAACCAAGCTCACGACAACAAACCCCTTCCACCGCTCCCATCACCACCGGAGAACGTTTGCATCGACGATGTGGCTGCTACGCTTCCCTCAGGTTCCGGTGACAAGGATCACGGCCACTCACCGCCGCAAGAAAAGATGTGCATGGACGACATGTTACAGAAGTACTGCGGGGAGTTCGGGCGGTGGCAGCTGAGGCAATTCATTCTGGTCAGTCTTGCATGCATCCTGGAGGCATTCCACTCCATGGTCATGATTTTTGCTGACCATGAACCCACCTGGAGGTGCCTCTCCGGCTCCGCCGGTTCAGGTTGCTCCGCCACCGCCACGAGCGTCTGTCACCACAAACCGGGTTCGTGGGAGTGGGTTGGAGGACGGAATAGGTCCACCGTGTCGGAGTGGGGATTGATATGCGGTGGGAAGTTTAAGGTTGGACTTGTCCAAGCGTTGTTCTTCCTCGGCTGTACCATCGGTGCTGGAATATTTGGTCACCTCTCAGACTCGTTTTTGGGAAGGAAAGGTTCTCTCACACTGACTTGTGTCCTAAACACAATCTTTGGTTGCTTAACAGCATTGTCCCCCAATTATTGGGTATATGCTGTCTTTCGTATCCTCACTGGTTTCACCATTGGTGGTGTTGGCATCAATGTCTTCGCACTCGCCAATGAACCAGTGGGCCCTTCGAAGCGTGGTGTTGCTGGAATGTCCACCTTCTATTTCTTTCCATCTGGTGTTGCTATTCTTTCAGGCATTGCTTACTTCTTCCAAAAATGGCGCCATCTTTACATTGCTTCATCTATTCCTTCTATCCTCTTTGTGTTCTTTGTCATTCCTTTTATATCTGAGTCACCAAGATGGTACCTTGTTCGTGGGAAAATAAACGAAGCAATGAAGCTCATGTCGACCATTGCCTCCACCAATGGGAAGCACCTCCCCAGTAACGTTATCCTTGTACTTGACCAAGTATTATCATCTATACCAAATGATGGAAAAGAAGAGTCATTTACAGTAAATGATAGCAAAGAAACATCACCAAAACCAAATGAAGGCAAAGAAGCATCACCCATACAAAATTATGGCAAAGAAATACCACCAAAAATAAATGATGGCAAAGATGCAACATCTATAACAAATGAAGCCACAGGTACCGAAGAAACTGTAAAGAATAAAATATTTGAAAACAAAGATGCAATTTCTGCATCAATCTTGGATGTAATTCGGTCCCCAGCTACACGTATAAGGTTATTCCTCGCAGTGGACCTTAGCTTCTTAGTCTCTTTGGTGTACTATGGTCTGAGCTTGAATGTGGTGAACTTAGGAGTCAACCTTTACATGAATGTGGCTCTAAATTCACTGTCAGAGTTACCTGCCTTCATGATAACAGCATTGTTATCTGACAGGTTTGGGAGAAAGCGGTTAACTCTAGGGACCATGTGGTTCAGCGGGTTATTTTGTTTGATAGGGAGTTTTATGAAGAAAGTTGGTGTATGGAAGATAGTGAGGATGATATGTGGAATTCTTGGAATATTTGGGATGGCTGGAACTTATAATTTATTATTTATTTACATTGCGGAGCTGTTTCCAACGGTTGTAAGGAGTGTCTCACTGGGTTGTTCGACCCAAGCATCACAAATGGGGGCTATATTGGCACCATTTGTTGTGGTTTTGGGAGGTTGGTTACCATTTGGGGTGTTTGCAGCATGTGCTATATTTGGTGGGGTGTTTGCAATATTTCTACCAGAGACAATGAACAAACCCTTATATGACACAATTGCTGGACTAGAGGCTGCAATTGCATGA 1827 0.4543 MAATTSSVSNNQAHDNKPLPPLPSPPENVCIDDVAATLPSGSGDKDHGHSPPQEKMCMDDMLQKYCGEFGRWQLRQFILVSLACILEAFHSMVMIFADHEPTWRCLSGSAGSGCSATATSVCHHKPGSWEWVGGRNRSTVSEWGLICGGKFKVGLVQALFFLGCTIGAGIFGHLSDSFLGRKGSLTLTCVLNTIFGCLTALSPNYWVYAVFRILTGFTIGGVGINVFALANEPVGPSKRGVAGMSTFYFFPSGVAILSGIAYFFQKWRHLYIASSIPSILFVFFVIPFISESPRWYLVRGKINEAMKLMSTIASTNGKHLPSNVILVLDQVLSSIPNDGKEESFTVNDSKETSPKPNEGKEASPIQNYGKEIPPKINDGKDATSITNEATGTEETVKNKIFENKDAISASILDVIRSPATRIRLFLAVDLSFLVSLVYYGLSLNVVNLGVNLYMNVALNSLSELPAFMITALLSDRFGRKRLTLGTMWFSGLFCLIGSFMKKVGVWKIVRMICGILGIFGMAGTYNLLFIYIAELFPTVVRSVSLGCSTQASQMGAILAPFVVVLGGWLPFGVFAACAIFGGVFAIFLPETMNKPLYDTIAGLEAAIA 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0637 608 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 58 334 - -
Lal10g0637 608 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 394 606 - -
Lal10g0637 608 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 394 606 - -
Lal10g0637 608 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 58 334 - -
Lal10g0637 608 SUPERFAMILY MFS general substrate transporter 70 596 IPR036259 -
Lal10g0637 608 ProSitePatterns Sugar transport proteins signature 2. 214 239 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lal10g0637 608 Gene3D MFS general substrate transporter like domains 137 600 IPR036259 -
Lal10g0637 608 MobiDBLite consensus disorder prediction 343 357 - -
Lal10g0637 608 ProSitePatterns Sugar transport proteins signature 1. 470 486 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lal10g0637 608 MobiDBLite consensus disorder prediction 1 17 - -
Lal10g0637 608 Pfam Sugar (and other) transporter 396 597 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal10g0637 608 Pfam Sugar (and other) transporter 152 315 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal10g0637 608 MobiDBLite consensus disorder prediction 1 28 - -
Lal10g0637 608 ProSiteProfiles Major facilitator superfamily (MFS) profile. 76 593 IPR020846 GO:0022857
Lal10g0637 608 MobiDBLite consensus disorder prediction 339 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0637 Lal-Chr10 14179427 14184992 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0637 393 606 Organic Solute Cotransporters AT3G20660 63.084 5.00e-85 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0637 K08202 - gmx:100797665 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0637 10 14179427 14184992 Lal1g0544 1 3503891 3507639 PCT
Lal1g0544 1 3503891 3507639 Lal10g0637 10 14179427 14184992 PCT