Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2312 ATGGAGAGCAGCAGTGGGATTGAGAGCACGGGGGGGCGTGCGCCACTGTCAGGGGTGGTGGCAGATTGTGTGAAGCGGTGGTTCAAAGACACTCTGAAGGAGGCTAAGGCAGGTGATGTTAACATGCAGGTCTTGGTTGGTCAGATGTACTATCATGGCTATGGTGTTCCCAGAGATGCTCAGAAGGGAAGAATTTGGCTGACTAAAGCGTCGAGGGTTAGGTCTTCAGTTTGGAGAGTTGGTGGTAAACGTCCAGGTTATAATGCAAGCGACTCTGAGTCTGACGAAGAAGAAGATTCTTAA 303 0.505 MESSSGIESTGGRAPLSGVVADCVKRWFKDTLKEAKAGDVNMQVLVGQMYYHGYGVPRDAQKGRIWLTKASRVRSSVWRVGGKRPGYNASDSESDEEEDS* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2312 100 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 4 98 - -
Gso9g2312 100 SMART sel1 40 75 IPR006597 -
Gso9g2312 100 SUPERFAMILY HCP-like 32 71 - -
Gso9g2312 100 Gene3D Tetratricopeptide repeat domain 19 85 IPR011990 GO:0005515
Gso9g2312 100 MobiDBLite consensus disorder prediction 81 100 - -
Gso9g2312 100 PANTHER EXPRESSED PROTEIN 4 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2312 Gso-Chr9 47397765 47401442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2312 - - gmx:100527576 186.422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g2312 9 47397765 47401442 Gso1g1092 1 44616508 44621208 PCT
Gso1g1092 1 44616508 44621208 Gso9g2312 9 47397765 47401442 PCT